Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 AL445567.2-201ENST00000618935 498 ntBASIC8.99□□□□□ -0.97
HOXD11P31277 AC005841.2-201ENST00000637658 1167 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
HOXD11P31277 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC8.99□□□□□ -0.97
HOXD11P31277 AL353743.1-202ENST00000431724 1695 ntBASIC8.99□□□□□ -0.97
HOXD11P31277 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
HOXD11P31277 EDNRB-201ENST00000334286 4277 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
HOXD11P31277 CUL9-202ENST00000372647 7684 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
HOXD11P31277 DARS2-201ENST00000361951 3506 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
HOXD11P31277 Z82209.1-201ENST00000422141 2135 ntBASIC8.99□□□□□ -0.97
HOXD11P31277 AP001284.1-201ENST00000528393 2118 ntBASIC8.99□□□□□ -0.97
HOXD11P31277 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
HOXD11P31277 LINC00898-201ENST00000380990 4185 ntTSL 2 BASIC8.99□□□□□ -0.97
HOXD11P31277 BTF3L4-202ENST00000472944 2159 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
HOXD11P31277 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
HOXD11P31277 ZMYND8-205ENST00000360911 4991 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
HOXD11P31277 RARB-201ENST00000330688 3084 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
HOXD11P31277 SMC6-207ENST00000448223 5233 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
HOXD11P31277 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC8.98□□□□□ -0.97
HOXD11P31277 LIPH-202ENST00000424591 2065 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
HOXD11P31277 ZNF217-201ENST00000302342 5633 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
HOXD11P31277 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
HOXD11P31277 APOL2-202ENST00000358502 2551 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
HOXD11P31277 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC8.98□□□□□ -0.97
HOXD11P31277 KCNJ15-221ENST00000613499 3049 ntAPPRIS P1 TSL 4 BASIC8.98□□□□□ -0.97
HOXD11P31277 FAXDC2-201ENST00000326080 3251 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
HOXD11P31277 HELQ-204ENST00000510985 3315 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
HOXD11P31277 LILRB4-204ENST00000391736 4002 ntAPPRIS P3 TSL 5 BASIC8.98□□□□□ -0.97
HOXD11P31277 AC010894.1-201ENST00000313760 361 ntBASIC8.98□□□□□ -0.97
HOXD11P31277 Y_RNA.101-201ENST00000363154 102 ntBASIC8.98□□□□□ -0.97
HOXD11P31277 MIR30C1-201ENST00000385227 89 ntBASIC8.98□□□□□ -0.97
HOXD11P31277 AC133644.1-201ENST00000398171 937 ntBASIC8.98□□□□□ -0.97
HOXD11P31277 EIF4EBP2P3-201ENST00000403144 334 ntBASIC8.98□□□□□ -0.97
HOXD11P31277 AL031736.2-201ENST00000426573 787 ntBASIC8.98□□□□□ -0.97
HOXD11P31277 AL135924.2-201ENST00000427901 361 ntTSL 3 BASIC8.98□□□□□ -0.97
HOXD11P31277 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC8.98□□□□□ -0.97
HOXD11P31277 EEF1A1P1-201ENST00000447052 739 ntBASIC8.98□□□□□ -0.97
HOXD11P31277 snoU109.4-201ENST00000458953 143 ntBASIC8.98□□□□□ -0.97
HOXD11P31277 LINC01480-201ENST00000483481 467 ntTSL 2 BASIC8.98□□□□□ -0.97
HOXD11P31277 LINC01085-203ENST00000511195 326 ntBASIC8.98□□□□□ -0.97
HOXD11P31277 OR7E159P-201ENST00000553761 298 ntBASIC8.98□□□□□ -0.97
HOXD11P31277 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC8.98□□□□□ -0.97
HOXD11P31277 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC8.98□□□□□ -0.97
HOXD11P31277 AC023827.2-201ENST00000566880 1061 ntBASIC8.98□□□□□ -0.97
HOXD11P31277 AC114477.1-201ENST00000605097 605 ntBASIC8.98□□□□□ -0.97
HOXD11P31277 AC089999.3-201ENST00000622440 577 ntBASIC8.98□□□□□ -0.97
HOXD11P31277 HLA-B-258ENST00000640615 240 ntBASIC8.98□□□□□ -0.97
HOXD11P31277 ASTE1-201ENST00000264992 2664 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
HOXD11P31277 PAK5-202ENST00000378423 4613 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
HOXD11P31277 POLR2J3-215ENST00000511313 4630 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
HOXD11P31277 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC8.98□□□□□ -0.97
HOXD11P31277 FN1-209ENST00000432072 7759 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
HOXD11P31277 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
HOXD11P31277 ARNT2-207ENST00000533983 6690 ntAPPRIS ALT1 TSL 5 BASIC8.98□□□□□ -0.97
HOXD11P31277 BRPF3-211ENST00000534400 4254 ntTSL 5 BASIC8.98□□□□□ -0.97
HOXD11P31277 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC8.98□□□□□ -0.97
HOXD11P31277 MAP3K20-208ENST00000539448 2312 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
HOXD11P31277 ETFB-202ENST00000354232 3551 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
HOXD11P31277 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
HOXD11P31277 GOLGA8A-202ENST00000432566 4577 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
HOXD11P31277 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC8.98□□□□□ -0.97
HOXD11P31277 ABRAXAS1-206ENST00000506553 1869 ntTSL 5 BASIC8.98□□□□□ -0.97
HOXD11P31277 EPB41L2-201ENST00000337057 4457 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
HOXD11P31277 AC006141.1-201ENST00000581917 2170 ntBASIC8.97□□□□□ -0.97
HOXD11P31277 EXTL2-202ENST00000370114 3985 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
HOXD11P31277 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC8.97□□□□□ -0.97
HOXD11P31277 PPP6R3-218ENST00000529710 3228 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
HOXD11P31277 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
HOXD11P31277 AC092821.2-201ENST00000545710 2042 ntBASIC8.97□□□□□ -0.97
HOXD11P31277 ANKS1B-220ENST00000550693 3372 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
HOXD11P31277 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC8.97□□□□□ -0.97
HOXD11P31277 EIF1AD-201ENST00000312234 2887 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
HOXD11P31277 ZFYVE26-209ENST00000557306 1533 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
HOXD11P31277 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC8.97□□□□□ -0.97
HOXD11P31277 ATP9B-202ENST00000426216 4361 ntTSL 5 BASIC8.97□□□□□ -0.97
HOXD11P31277 C14orf2-201ENST00000286953 643 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
HOXD11P31277 Y_RNA.114-201ENST00000363265 113 ntBASIC8.97□□□□□ -0.97
HOXD11P31277 Y_RNA.220-201ENST00000364244 109 ntBASIC8.97□□□□□ -0.97
HOXD11P31277 CST11-201ENST00000377007 461 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
HOXD11P31277 MIR621-201ENST00000384919 96 ntBASIC8.97□□□□□ -0.97
HOXD11P31277 MT-TS1-201ENST00000387416 69 ntBASIC8.97□□□□□ -0.97
HOXD11P31277 RN7SKP188-201ENST00000410789 317 ntBASIC8.97□□□□□ -0.97
HOXD11P31277 SEM1-204ENST00000417009 350 ntTSL 3 BASIC8.97□□□□□ -0.97
HOXD11P31277 RPL21P66-201ENST00000426566 466 ntBASIC8.97□□□□□ -0.97
HOXD11P31277 ALG13-204ENST00000436609 3812 ntTSL 5 BASIC8.97□□□□□ -0.97
HOXD11P31277 AC048341.1-201ENST00000480482 403 ntBASIC8.97□□□□□ -0.97
HOXD11P31277 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
HOXD11P31277 LINC01480-203ENST00000494375 409 ntTSL 2 BASIC8.97□□□□□ -0.97
HOXD11P31277 ENSA-210ENST00000503241 574 ntTSL 3 BASIC8.97□□□□□ -0.97
HOXD11P31277 FTH1P11-201ENST00000517577 551 ntBASIC8.97□□□□□ -0.97
HOXD11P31277 AC134508.1-201ENST00000570082 2977 ntBASIC8.97□□□□□ -0.97
HOXD11P31277 MIR4782-201ENST00000577987 79 ntBASIC8.97□□□□□ -0.97
HOXD11P31277 RN7SL531P-201ENST00000578464 282 ntBASIC8.97□□□□□ -0.97
HOXD11P31277 RN7SL131P-201ENST00000579043 256 ntBASIC8.97□□□□□ -0.97
HOXD11P31277 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC8.97□□□□□ -0.97
HOXD11P31277 AC113143.2-201ENST00000603849 394 ntBASIC8.97□□□□□ -0.97
HOXD11P31277 MIR6892-201ENST00000612346 115 ntBASIC8.97□□□□□ -0.97
HOXD11P31277 KCNQ1OT1_2.1-201ENST00000619507 196 ntBASIC8.97□□□□□ -0.97
HOXD11P31277 AL356095.2-201ENST00000624025 457 ntBASIC8.97□□□□□ -0.97
HOXD11P31277 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC8.97□□□□□ -0.97
HOXD11P31277 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 245.5 ms