Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 RPL7P2-201ENST00000427639 268 ntBASIC4.41□□□□□ -1.7
HOXA9P31269 RPL12P46-201ENST00000436610 195 ntBASIC4.41□□□□□ -1.7
HOXA9P31269 ATP5G1P3-201ENST00000463301 410 ntBASIC4.41□□□□□ -1.7
HOXA9P31269 UBTFL6-201ENST00000477929 1024 ntBASIC4.41□□□□□ -1.7
HOXA9P31269 AL133372.1-201ENST00000493565 745 ntBASIC4.41□□□□□ -1.7
HOXA9P31269 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.41□□□□□ -1.7
HOXA9P31269 NPM1P41-201ENST00000512920 831 ntBASIC4.41□□□□□ -1.7
HOXA9P31269 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.41□□□□□ -1.7
HOXA9P31269 AC090151.1-201ENST00000520784 730 ntBASIC4.41□□□□□ -1.7
HOXA9P31269 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.41□□□□□ -1.7
HOXA9P31269 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.41□□□□□ -1.7
HOXA9P31269 AC027455.1-201ENST00000574104 594 ntBASIC4.41□□□□□ -1.7
HOXA9P31269 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXA9P31269 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.41□□□□□ -1.7
HOXA9P31269 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXA9P31269 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.41□□□□□ -1.7
HOXA9P31269 AL356863.1-201ENST00000623378 1080 ntBASIC4.41□□□□□ -1.7
HOXA9P31269 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.41□□□□□ -1.7
HOXA9P31269 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HOXA9P31269 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXA9P31269 BX005019.1-201ENST00000561881 1810 ntBASIC4.41□□□□□ -1.7
HOXA9P31269 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HOXA9P31269 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXA9P31269 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXA9P31269 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
HOXA9P31269 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXA9P31269 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXA9P31269 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.41□□□□□ -1.7
HOXA9P31269 AP001002.1-201ENST00000625148 1513 ntBASIC4.41□□□□□ -1.7
HOXA9P31269 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXA9P31269 USP9YP4-201ENST00000424401 1745 ntBASIC4.41□□□□□ -1.7
HOXA9P31269 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HOXA9P31269 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
HOXA9P31269 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HOXA9P31269 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.4□□□□□ -1.7
HOXA9P31269 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HOXA9P31269 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
HOXA9P31269 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.4□□□□□ -1.7
HOXA9P31269 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.4□□□□□ -1.7
HOXA9P31269 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HOXA9P31269 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.4□□□□□ -1.7
HOXA9P31269 AL356489.2-201ENST00000566968 3528 ntBASIC4.4□□□□□ -1.7
HOXA9P31269 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.4□□□□□ -1.7
HOXA9P31269 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
HOXA9P31269 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HOXA9P31269 MIR1911-201ENST00000410783 80 ntBASIC4.4□□□□□ -1.71
HOXA9P31269 CYCSP19-201ENST00000411715 316 ntBASIC4.4□□□□□ -1.71
HOXA9P31269 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.4□□□□□ -1.71
HOXA9P31269 RBMY1KP-201ENST00000423480 476 ntBASIC4.4□□□□□ -1.71
HOXA9P31269 AC007389.2-201ENST00000434630 306 ntBASIC4.4□□□□□ -1.71
HOXA9P31269 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.4□□□□□ -1.71
HOXA9P31269 RPL5P16-201ENST00000471467 790 ntBASIC4.4□□□□□ -1.71
HOXA9P31269 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.4□□□□□ -1.71
HOXA9P31269 AC104164.2-201ENST00000496953 495 ntBASIC4.4□□□□□ -1.71
HOXA9P31269 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HOXA9P31269 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HOXA9P31269 AC023632.4-201ENST00000517783 191 ntBASIC4.4□□□□□ -1.71
HOXA9P31269 CYCSP28-201ENST00000534284 321 ntBASIC4.4□□□□□ -1.71
HOXA9P31269 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.4□□□□□ -1.71
HOXA9P31269 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.4□□□□□ -1.71
HOXA9P31269 SLC25A36P1-201ENST00000590111 465 ntBASIC4.4□□□□□ -1.71
HOXA9P31269 AL713998.2-201ENST00000604538 1198 ntBASIC4.4□□□□□ -1.71
HOXA9P31269 AC090912.3-201ENST00000609775 533 ntBASIC4.4□□□□□ -1.71
HOXA9P31269 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.4□□□□□ -1.71
HOXA9P31269 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HOXA9P31269 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.4□□□□□ -1.71
HOXA9P31269 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HOXA9P31269 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.4□□□□□ -1.71
HOXA9P31269 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HOXA9P31269 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXA9P31269 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXA9P31269 AC092162.3-201ENST00000624511 1624 ntBASIC4.39□□□□□ -1.71
HOXA9P31269 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HOXA9P31269 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HOXA9P31269 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXA9P31269 MAPK10-303ENST00000641324 3959 ntBASIC4.39□□□□□ -1.71
HOXA9P31269 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HOXA9P31269 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
HOXA9P31269 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
HOXA9P31269 ATP5F1P3-201ENST00000397213 657 ntBASIC4.39□□□□□ -1.71
HOXA9P31269 HDGFP1-201ENST00000405943 252 ntBASIC4.39□□□□□ -1.71
HOXA9P31269 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.39□□□□□ -1.71
HOXA9P31269 CYCSP10-201ENST00000417973 294 ntBASIC4.39□□□□□ -1.71
HOXA9P31269 AC099336.2-201ENST00000422457 254 ntBASIC4.39□□□□□ -1.71
HOXA9P31269 AC022022.1-201ENST00000430304 178 ntBASIC4.39□□□□□ -1.71
HOXA9P31269 CASP3P1-201ENST00000446037 609 ntBASIC4.39□□□□□ -1.71
HOXA9P31269 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXA9P31269 AC099560.2-201ENST00000457554 255 ntBASIC4.39□□□□□ -1.71
HOXA9P31269 RPL38P1-201ENST00000460914 211 ntBASIC4.39□□□□□ -1.71
HOXA9P31269 RPS29P19-201ENST00000479709 171 ntBASIC4.39□□□□□ -1.71
HOXA9P31269 BNIP3P41-201ENST00000503774 571 ntBASIC4.39□□□□□ -1.71
HOXA9P31269 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.39□□□□□ -1.71
HOXA9P31269 VTA1P2-201ENST00000520205 911 ntBASIC4.39□□□□□ -1.71
HOXA9P31269 AC022655.2-201ENST00000577280 318 ntBASIC4.39□□□□□ -1.71
HOXA9P31269 AP005901.4-201ENST00000577336 569 ntBASIC4.39□□□□□ -1.71
HOXA9P31269 MIR4444-1-201ENST00000581696 74 ntBASIC4.39□□□□□ -1.71
HOXA9P31269 MIR4444-2-201ENST00000584390 74 ntBASIC4.39□□□□□ -1.71
HOXA9P31269 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXA9P31269 AC022960.2-201ENST00000616300 666 ntBASIC4.39□□□□□ -1.71
HOXA9P31269 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms