Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RXRBP28702 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RXRBP28702 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC7□□□□□ -1.29
RXRBP28702 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC7□□□□□ -1.29
RXRBP28702 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7□□□□□ -1.29
RXRBP28702 AL137141.1-201ENST00000624622 4836 ntBASIC7□□□□□ -1.29
RXRBP28702 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
RXRBP28702 OR4K15-201ENST00000305051 1216 ntBASIC7□□□□□ -1.29
RXRBP28702 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC7□□□□□ -1.29
RXRBP28702 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC7□□□□□ -1.29
RXRBP28702 RPS27AP12-201ENST00000429552 465 ntBASIC7□□□□□ -1.29
RXRBP28702 AC004865.1-201ENST00000442276 1003 ntBASIC7□□□□□ -1.29
RXRBP28702 HMGB1P48-201ENST00000446155 598 ntBASIC7□□□□□ -1.29
RXRBP28702 AL034418.1-201ENST00000448675 860 ntBASIC7□□□□□ -1.29
RXRBP28702 AC013356.1-201ENST00000489027 564 ntBASIC7□□□□□ -1.29
RXRBP28702 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC7□□□□□ -1.29
RXRBP28702 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC7□□□□□ -1.29
RXRBP28702 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC7□□□□□ -1.29
RXRBP28702 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC7□□□□□ -1.29
RXRBP28702 NPM1P6-201ENST00000521088 871 ntBASIC7□□□□□ -1.29
RXRBP28702 AP003392.2-201ENST00000527269 208 ntBASIC7□□□□□ -1.29
RXRBP28702 AP005639.2-201ENST00000527592 928 ntBASIC7□□□□□ -1.29
RXRBP28702 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC7□□□□□ -1.29
RXRBP28702 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC7□□□□□ -1.29
RXRBP28702 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC7□□□□□ -1.29
RXRBP28702 AC025594.3-201ENST00000613068 790 ntBASIC7□□□□□ -1.29
RXRBP28702 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC7□□□□□ -1.29
RXRBP28702 AC011944.2-201ENST00000624440 683 ntBASIC7□□□□□ -1.29
RXRBP28702 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC7□□□□□ -1.29
RXRBP28702 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RXRBP28702 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
RXRBP28702 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC7□□□□□ -1.29
RXRBP28702 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC7□□□□□ -1.29
RXRBP28702 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC7□□□□□ -1.29
RXRBP28702 AP000776.1-201ENST00000530032 1663 ntBASIC7□□□□□ -1.29
RXRBP28702 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
RXRBP28702 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RXRBP28702 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.99□□□□□ -1.29
RXRBP28702 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RXRBP28702 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.99□□□□□ -1.29
RXRBP28702 AL137100.1-201ENST00000556703 1620 ntBASIC6.99□□□□□ -1.29
RXRBP28702 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.99□□□□□ -1.29
RXRBP28702 MIR1182-201ENST00000408363 97 ntBASIC6.99□□□□□ -1.29
RXRBP28702 ELOCP19-201ENST00000411919 318 ntBASIC6.99□□□□□ -1.29
RXRBP28702 XKRYP4-201ENST00000414395 483 ntBASIC6.99□□□□□ -1.29
RXRBP28702 TCEA1P4-201ENST00000415066 844 ntBASIC6.99□□□□□ -1.29
RXRBP28702 RPL36AP36-201ENST00000418616 301 ntBASIC6.99□□□□□ -1.29
RXRBP28702 AC245054.1-201ENST00000420944 258 ntBASIC6.99□□□□□ -1.29
RXRBP28702 EI24P4-201ENST00000423683 1078 ntBASIC6.99□□□□□ -1.29
RXRBP28702 AL732292.1-201ENST00000426692 226 ntBASIC6.99□□□□□ -1.29
RXRBP28702 AP001324.1-201ENST00000428553 399 ntBASIC6.99□□□□□ -1.29
RXRBP28702 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC6.99□□□□□ -1.29
RXRBP28702 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC6.99□□□□□ -1.29
RXRBP28702 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC6.99□□□□□ -1.29
RXRBP28702 TRIM60P18-201ENST00000441518 828 ntBASIC6.99□□□□□ -1.29
RXRBP28702 AC079922.1-201ENST00000443291 359 ntBASIC6.99□□□□□ -1.29
RXRBP28702 XKRYP5-201ENST00000449659 483 ntBASIC6.99□□□□□ -1.29
RXRBP28702 UBDP1-202ENST00000457888 382 ntBASIC6.99□□□□□ -1.29
RXRBP28702 CR383656.1-201ENST00000484916 377 ntBASIC6.99□□□□□ -1.29
RXRBP28702 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RXRBP28702 RN7SKP244-201ENST00000516513 307 ntBASIC6.99□□□□□ -1.29
RXRBP28702 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC6.99□□□□□ -1.29
RXRBP28702 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC6.99□□□□□ -1.29
RXRBP28702 PMS2P3-207ENST00000529061 717 ntBASIC6.99□□□□□ -1.29
RXRBP28702 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
RXRBP28702 AL121594.2-201ENST00000541658 472 ntBASIC6.99□□□□□ -1.29
RXRBP28702 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.99□□□□□ -1.29
RXRBP28702 AC023575.1-201ENST00000580510 358 ntBASIC6.99□□□□□ -1.29
RXRBP28702 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC6.99□□□□□ -1.29
RXRBP28702 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RXRBP28702 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.99□□□□□ -1.29
RXRBP28702 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC6.99□□□□□ -1.29
RXRBP28702 AC006539.2-201ENST00000601729 572 ntBASIC6.99□□□□□ -1.29
RXRBP28702 AC133552.5-201ENST00000604266 540 ntBASIC6.99□□□□□ -1.29
RXRBP28702 AC018714.1-201ENST00000605028 208 ntBASIC6.99□□□□□ -1.29
RXRBP28702 AL592148.2-201ENST00000612210 372 ntBASIC6.99□□□□□ -1.29
RXRBP28702 AC007014.2-201ENST00000615581 479 ntBASIC6.99□□□□□ -1.29
RXRBP28702 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
RXRBP28702 AC116618.1-201ENST00000634617 774 ntBASIC6.99□□□□□ -1.29
RXRBP28702 AC099654.5-201ENST00000636479 350 ntBASIC6.99□□□□□ -1.29
RXRBP28702 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.99□□□□□ -1.29
RXRBP28702 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RXRBP28702 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
RXRBP28702 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RXRBP28702 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RXRBP28702 DHX40P1-201ENST00000588725 1412 ntBASIC6.99□□□□□ -1.29
RXRBP28702 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RXRBP28702 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.99□□□□□ -1.29
RXRBP28702 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RXRBP28702 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RXRBP28702 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RXRBP28702 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RXRBP28702 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
RXRBP28702 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.98□□□□□ -1.29
RXRBP28702 AC092747.4-201ENST00000620519 1861 ntBASIC6.98□□□□□ -1.29
RXRBP28702 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
RXRBP28702 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC6.98□□□□□ -1.29
RXRBP28702 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.98□□□□□ -1.29
RXRBP28702 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RXRBP28702 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms