Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC7□□□□□ -1.29
RFX1P22670 PPIAP24-201ENST00000328558 471 ntBASIC7□□□□□ -1.29
RFX1P22670 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7□□□□□ -1.29
RFX1P22670 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7□□□□□ -1.29
RFX1P22670 SNORD8-201ENST00000363915 110 ntBASIC7□□□□□ -1.29
RFX1P22670 SNORA70H-201ENST00000383910 135 ntBASIC7□□□□□ -1.29
RFX1P22670 Y_RNA.409-201ENST00000383990 98 ntBASIC7□□□□□ -1.29
RFX1P22670 SNORA70J-201ENST00000384182 135 ntBASIC7□□□□□ -1.29
RFX1P22670 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
RFX1P22670 RPL7P25-201ENST00000404151 721 ntBASIC7□□□□□ -1.29
RFX1P22670 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7□□□□□ -1.29
RFX1P22670 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC7□□□□□ -1.29
RFX1P22670 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC7□□□□□ -1.29
RFX1P22670 AC096632.1-201ENST00000427395 310 ntBASIC7□□□□□ -1.29
RFX1P22670 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7□□□□□ -1.29
RFX1P22670 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC7□□□□□ -1.29
RFX1P22670 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC7□□□□□ -1.29
RFX1P22670 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC7□□□□□ -1.29
RFX1P22670 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC7□□□□□ -1.29
RFX1P22670 NPM1P27-201ENST00000502784 830 ntBASIC7□□□□□ -1.29
RFX1P22670 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7□□□□□ -1.29
RFX1P22670 HMGN1P16-201ENST00000508308 283 ntBASIC7□□□□□ -1.29
RFX1P22670 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC7□□□□□ -1.29
RFX1P22670 UBE2Q2P10-201ENST00000514854 900 ntBASIC7□□□□□ -1.29
RFX1P22670 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC7□□□□□ -1.29
RFX1P22670 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC7□□□□□ -1.29
RFX1P22670 AC090424.1-201ENST00000535243 736 ntBASIC7□□□□□ -1.29
RFX1P22670 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC7□□□□□ -1.29
RFX1P22670 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC7□□□□□ -1.29
RFX1P22670 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7□□□□□ -1.29
RFX1P22670 AL512360.1-201ENST00000555346 234 ntBASIC7□□□□□ -1.29
RFX1P22670 LARP7P2-201ENST00000575306 125 ntBASIC7□□□□□ -1.29
RFX1P22670 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC7□□□□□ -1.29
RFX1P22670 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC7□□□□□ -1.29
RFX1P22670 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC7□□□□□ -1.29
RFX1P22670 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC7□□□□□ -1.29
RFX1P22670 AC011468.4-201ENST00000603942 409 ntBASIC7□□□□□ -1.29
RFX1P22670 RPL12P48-201ENST00000605620 304 ntBASIC7□□□□□ -1.29
RFX1P22670 AC090948.2-201ENST00000607363 564 ntBASIC7□□□□□ -1.29
RFX1P22670 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7□□□□□ -1.29
RFX1P22670 AC068722.2-201ENST00000618734 544 ntBASIC7□□□□□ -1.29
RFX1P22670 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7□□□□□ -1.29
RFX1P22670 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC7□□□□□ -1.29
RFX1P22670 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RFX1P22670 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7□□□□□ -1.29
RFX1P22670 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
RFX1P22670 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
RFX1P22670 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RFX1P22670 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7□□□□□ -1.29
RFX1P22670 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC7□□□□□ -1.29
RFX1P22670 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
RFX1P22670 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RFX1P22670 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7□□□□□ -1.29
RFX1P22670 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC7□□□□□ -1.29
RFX1P22670 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.99□□□□□ -1.29
RFX1P22670 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
RFX1P22670 AC023245.2-201ENST00000530760 2978 ntBASIC6.99□□□□□ -1.29
RFX1P22670 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RFX1P22670 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.99□□□□□ -1.29
RFX1P22670 AC241584.2-201ENST00000637142 2090 ntBASIC6.99□□□□□ -1.29
RFX1P22670 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RFX1P22670 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
RFX1P22670 Y_RNA.481-201ENST00000384373 102 ntBASIC6.99□□□□□ -1.29
RFX1P22670 RNU6-1009P-201ENST00000390996 107 ntBASIC6.99□□□□□ -1.29
RFX1P22670 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RFX1P22670 RANP6-201ENST00000413691 644 ntBASIC6.99□□□□□ -1.29
RFX1P22670 RPL7AP14-201ENST00000424041 802 ntBASIC6.99□□□□□ -1.29
RFX1P22670 AC009965.2-201ENST00000425328 970 ntBASIC6.99□□□□□ -1.29
RFX1P22670 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC6.99□□□□□ -1.29
RFX1P22670 MTCO2P11-201ENST00000431069 680 ntBASIC6.99□□□□□ -1.29
RFX1P22670 AC007679.3-201ENST00000434035 414 ntBASIC6.99□□□□□ -1.29
RFX1P22670 AC110602.1-201ENST00000437414 318 ntBASIC6.99□□□□□ -1.29
RFX1P22670 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC6.99□□□□□ -1.29
RFX1P22670 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC6.99□□□□□ -1.29
RFX1P22670 CFL1P4-201ENST00000451536 498 ntBASIC6.99□□□□□ -1.29
RFX1P22670 BX322784.1-201ENST00000455793 1077 ntBASIC6.99□□□□□ -1.29
RFX1P22670 UBDP1-202ENST00000457888 382 ntBASIC6.99□□□□□ -1.29
RFX1P22670 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.99□□□□□ -1.29
RFX1P22670 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC6.99□□□□□ -1.29
RFX1P22670 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
RFX1P22670 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.99□□□□□ -1.29
RFX1P22670 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.99□□□□□ -1.29
RFX1P22670 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.99□□□□□ -1.29
RFX1P22670 OR1E3-201ENST00000575608 948 ntBASIC6.99□□□□□ -1.29
RFX1P22670 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.99□□□□□ -1.29
RFX1P22670 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RFX1P22670 SMIM12P1-201ENST00000603004 274 ntBASIC6.99□□□□□ -1.29
RFX1P22670 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC6.99□□□□□ -1.29
RFX1P22670 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC6.99□□□□□ -1.29
RFX1P22670 MIR4302-201ENST00000638058 60 ntBASIC6.99□□□□□ -1.29
RFX1P22670 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.99□□□□□ -1.29
RFX1P22670 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RFX1P22670 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.99□□□□□ -1.29
RFX1P22670 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RFX1P22670 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.99□□□□□ -1.29
RFX1P22670 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
RFX1P22670 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RFX1P22670 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
RFX1P22670 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RFX1P22670 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms