Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC087516.1-201ENST00000561236 2428 ntBASIC6.76□□□□□ -1.33
ERCC3P19447 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC6.76□□□□□ -1.33
ERCC3P19447 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC6.76□□□□□ -1.33
ERCC3P19447 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.76□□□□□ -1.33
ERCC3P19447 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
ERCC3P19447 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
ERCC3P19447 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
ERCC3P19447 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC6.75□□□□□ -1.33
ERCC3P19447 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ERCC3P19447 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ERCC3P19447 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.75□□□□□ -1.33
ERCC3P19447 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ERCC3P19447 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
ERCC3P19447 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
ERCC3P19447 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ERCC3P19447 MIR133A2-201ENST00000347538 102 ntBASIC6.75□□□□□ -1.33
ERCC3P19447 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC6.75□□□□□ -1.33
ERCC3P19447 RNU1-59P-201ENST00000364829 162 ntBASIC6.75□□□□□ -1.33
ERCC3P19447 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC6.75□□□□□ -1.33
ERCC3P19447 U3.28-201ENST00000391249 210 ntBASIC6.75□□□□□ -1.33
ERCC3P19447 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC6.75□□□□□ -1.33
ERCC3P19447 RNU6-603P-201ENST00000411403 107 ntBASIC6.75□□□□□ -1.33
ERCC3P19447 AL389915.1-201ENST00000422463 466 ntBASIC6.75□□□□□ -1.33
ERCC3P19447 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC6.75□□□□□ -1.33
ERCC3P19447 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC6.75□□□□□ -1.33
ERCC3P19447 PRELID3BP10-201ENST00000431957 584 ntBASIC6.75□□□□□ -1.33
ERCC3P19447 AC092641.1-201ENST00000440229 772 ntBASIC6.75□□□□□ -1.33
ERCC3P19447 AC239809.1-201ENST00000450470 217 ntBASIC6.75□□□□□ -1.33
ERCC3P19447 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC6.75□□□□□ -1.33
ERCC3P19447 SLC25A51P1-201ENST00000468432 871 ntBASIC6.75□□□□□ -1.33
ERCC3P19447 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
ERCC3P19447 SIAH1P1-201ENST00000479411 923 ntBASIC6.75□□□□□ -1.33
ERCC3P19447 AC022215.1-201ENST00000481770 362 ntBASIC6.75□□□□□ -1.33
ERCC3P19447 AC090638.1-201ENST00000498296 909 ntBASIC6.75□□□□□ -1.33
ERCC3P19447 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.75□□□□□ -1.33
ERCC3P19447 CDC42P4-201ENST00000510507 563 ntBASIC6.75□□□□□ -1.33
ERCC3P19447 AF131216.2-201ENST00000512316 564 ntBASIC6.75□□□□□ -1.33
ERCC3P19447 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC6.75□□□□□ -1.33
ERCC3P19447 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.75□□□□□ -1.33
ERCC3P19447 AC008429.4-201ENST00000521201 182 ntBASIC6.75□□□□□ -1.33
ERCC3P19447 AP002453.2-201ENST00000533503 320 ntBASIC6.75□□□□□ -1.33
ERCC3P19447 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC6.75□□□□□ -1.33
ERCC3P19447 AC008127.2-201ENST00000549925 1075 ntBASIC6.75□□□□□ -1.33
ERCC3P19447 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC6.75□□□□□ -1.33
ERCC3P19447 DPPA2P4-201ENST00000563717 878 ntBASIC6.75□□□□□ -1.33
ERCC3P19447 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC6.75□□□□□ -1.33
ERCC3P19447 TXNP4-201ENST00000575018 310 ntBASIC6.75□□□□□ -1.33
ERCC3P19447 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.75□□□□□ -1.33
ERCC3P19447 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.75□□□□□ -1.33
ERCC3P19447 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC6.75□□□□□ -1.33
ERCC3P19447 SUMO2P15-201ENST00000604285 278 ntBASIC6.75□□□□□ -1.33
ERCC3P19447 AC116447.1-201ENST00000613153 453 ntBASIC6.75□□□□□ -1.33
ERCC3P19447 U1.25-201ENST00000614085 162 ntBASIC6.75□□□□□ -1.33
ERCC3P19447 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC6.75□□□□□ -1.33
ERCC3P19447 AC069234.4-201ENST00000621276 412 ntBASIC6.75□□□□□ -1.33
ERCC3P19447 CU639417.4-201ENST00000623928 207 ntBASIC6.75□□□□□ -1.33
ERCC3P19447 AL359740.1-201ENST00000624340 592 ntBASIC6.75□□□□□ -1.33
ERCC3P19447 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.75□□□□□ -1.33
ERCC3P19447 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ERCC3P19447 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
ERCC3P19447 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ERCC3P19447 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.75□□□□□ -1.33
ERCC3P19447 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ERCC3P19447 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ERCC3P19447 AL022393.1-201ENST00000625142 1677 ntBASIC6.74□□□□□ -1.33
ERCC3P19447 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
ERCC3P19447 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.74□□□□□ -1.33
ERCC3P19447 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
ERCC3P19447 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ERCC3P19447 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
ERCC3P19447 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC6.74□□□□□ -1.33
ERCC3P19447 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
ERCC3P19447 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.74□□□□□ -1.33
ERCC3P19447 FGF7P2-201ENST00000332473 296 ntBASIC6.74□□□□□ -1.33
ERCC3P19447 Y_RNA.3-201ENST00000362331 103 ntBASIC6.74□□□□□ -1.33
ERCC3P19447 RNU6-1042P-201ENST00000384204 107 ntBASIC6.74□□□□□ -1.33
ERCC3P19447 RNU6-441P-201ENST00000384545 106 ntBASIC6.74□□□□□ -1.33
ERCC3P19447 NPM1P4-201ENST00000414095 812 ntBASIC6.74□□□□□ -1.33
ERCC3P19447 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.74□□□□□ -1.33
ERCC3P19447 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ERCC3P19447 AL022331.1-201ENST00000429025 477 ntBASIC6.74□□□□□ -1.33
ERCC3P19447 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.74□□□□□ -1.33
ERCC3P19447 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC6.74□□□□□ -1.33
ERCC3P19447 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC6.74□□□□□ -1.33
ERCC3P19447 AC239367.2-201ENST00000447309 705 ntBASIC6.74□□□□□ -1.33
ERCC3P19447 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC6.74□□□□□ -1.33
ERCC3P19447 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC6.74□□□□□ -1.33
ERCC3P19447 SSXP1-201ENST00000453640 473 ntBASIC6.74□□□□□ -1.33
ERCC3P19447 RPL23AP40-201ENST00000487630 390 ntBASIC6.74□□□□□ -1.33
ERCC3P19447 AC108693.1-201ENST00000496068 432 ntBASIC6.74□□□□□ -1.33
ERCC3P19447 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC6.74□□□□□ -1.33
ERCC3P19447 AF213884.2-201ENST00000510417 903 ntBASIC6.74□□□□□ -1.33
ERCC3P19447 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.74□□□□□ -1.33
ERCC3P19447 RNU6-615P-201ENST00000516065 106 ntBASIC6.74□□□□□ -1.33
ERCC3P19447 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC6.74□□□□□ -1.33
ERCC3P19447 IGLVVI-25-1-201ENST00000521893 249 ntBASIC6.74□□□□□ -1.33
ERCC3P19447 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.74□□□□□ -1.33
ERCC3P19447 OSBPL9P2-201ENST00000526582 1228 ntBASIC6.74□□□□□ -1.33
ERCC3P19447 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC6.74□□□□□ -1.33
ERCC3P19447 OR6C7P-201ENST00000547875 934 ntBASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms