Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC5.57□□□□□ -1.52
ATF4P18848 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.57□□□□□ -1.52
ATF4P18848 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ATF4P18848 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
ATF4P18848 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
ATF4P18848 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.57□□□□□ -1.52
ATF4P18848 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ATF4P18848 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ATF4P18848 AC093535.2-201ENST00000624769 2326 ntBASIC5.57□□□□□ -1.52
ATF4P18848 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ATF4P18848 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.57□□□□□ -1.52
ATF4P18848 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ATF4P18848 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ATF4P18848 AL391380.1-201ENST00000439300 1432 ntBASIC5.57□□□□□ -1.52
ATF4P18848 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ATF4P18848 AL359955.1-201ENST00000455242 3275 ntBASIC5.56□□□□□ -1.52
ATF4P18848 AC144833.1-201ENST00000567953 4089 ntBASIC5.56□□□□□ -1.52
ATF4P18848 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.56□□□□□ -1.52
ATF4P18848 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ATF4P18848 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ATF4P18848 MAPK10-304ENST00000641341 3984 ntBASIC5.56□□□□□ -1.52
ATF4P18848 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ATF4P18848 AL359893.1-201ENST00000447628 1580 ntBASIC5.56□□□□□ -1.52
ATF4P18848 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
ATF4P18848 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ATF4P18848 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
ATF4P18848 OR2M1P-201ENST00000318104 951 ntBASIC5.56□□□□□ -1.52
ATF4P18848 RPL10P16-201ENST00000325000 645 ntBASIC5.56□□□□□ -1.52
ATF4P18848 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
ATF4P18848 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC5.56□□□□□ -1.52
ATF4P18848 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
ATF4P18848 Y_RNA.88-201ENST00000363029 99 ntBASIC5.56□□□□□ -1.52
ATF4P18848 RNU6-1085P-201ENST00000363576 107 ntBASIC5.56□□□□□ -1.52
ATF4P18848 SNORD8-201ENST00000363915 110 ntBASIC5.56□□□□□ -1.52
ATF4P18848 Y_RNA.256-201ENST00000364594 104 ntBASIC5.56□□□□□ -1.52
ATF4P18848 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ATF4P18848 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ATF4P18848 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
ATF4P18848 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ATF4P18848 RNU6-339P-201ENST00000384310 107 ntBASIC5.56□□□□□ -1.52
ATF4P18848 RN7SKP62-201ENST00000384539 329 ntBASIC5.56□□□□□ -1.52
ATF4P18848 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
ATF4P18848 U3.29-201ENST00000391296 212 ntBASIC5.56□□□□□ -1.52
ATF4P18848 GLULP6-201ENST00000399502 913 ntBASIC5.56□□□□□ -1.52
ATF4P18848 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.56□□□□□ -1.52
ATF4P18848 RN7SKP117-201ENST00000410175 264 ntBASIC5.56□□□□□ -1.52
ATF4P18848 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC5.56□□□□□ -1.52
ATF4P18848 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.56□□□□□ -1.52
ATF4P18848 MTCYBP24-201ENST00000420387 1106 ntBASIC5.56□□□□□ -1.52
ATF4P18848 OR5P4P-201ENST00000424698 917 ntBASIC5.56□□□□□ -1.52
ATF4P18848 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ATF4P18848 AC009299.1-201ENST00000429684 717 ntBASIC5.56□□□□□ -1.52
ATF4P18848 MTCO2P11-201ENST00000431069 680 ntBASIC5.56□□□□□ -1.52
ATF4P18848 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC5.56□□□□□ -1.52
ATF4P18848 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC5.56□□□□□ -1.52
ATF4P18848 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.56□□□□□ -1.52
ATF4P18848 LYPLA1P1-201ENST00000434514 622 ntBASIC5.56□□□□□ -1.52
ATF4P18848 RPS4XP4-201ENST00000443195 763 ntBASIC5.56□□□□□ -1.52
ATF4P18848 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.56□□□□□ -1.52
ATF4P18848 IFNWP4-201ENST00000453148 294 ntBASIC5.56□□□□□ -1.52
ATF4P18848 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC5.56□□□□□ -1.52
ATF4P18848 RPL37P6-202ENST00000464216 403 ntBASIC5.56□□□□□ -1.52
ATF4P18848 ST13P14-201ENST00000474095 734 ntBASIC5.56□□□□□ -1.52
ATF4P18848 RPS27P20-201ENST00000492051 246 ntBASIC5.56□□□□□ -1.52
ATF4P18848 AC079382.1-201ENST00000493346 557 ntBASIC5.56□□□□□ -1.52
ATF4P18848 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC5.56□□□□□ -1.52
ATF4P18848 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.56□□□□□ -1.52
ATF4P18848 AC008967.1-201ENST00000504843 163 ntBASIC5.56□□□□□ -1.52
ATF4P18848 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.56□□□□□ -1.52
ATF4P18848 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC5.56□□□□□ -1.52
ATF4P18848 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.56□□□□□ -1.52
ATF4P18848 AC105914.1-201ENST00000511798 226 ntBASIC5.56□□□□□ -1.52
ATF4P18848 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.56□□□□□ -1.52
ATF4P18848 RNU6-27P-201ENST00000516146 107 ntBASIC5.56□□□□□ -1.52
ATF4P18848 IGKV2D-36-201ENST00000518643 226 ntBASIC5.56□□□□□ -1.52
ATF4P18848 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
ATF4P18848 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.56□□□□□ -1.52
ATF4P18848 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC5.56□□□□□ -1.52
ATF4P18848 AC007363.1-201ENST00000604736 620 ntBASIC5.56□□□□□ -1.52
ATF4P18848 AL451044.1-201ENST00000604867 238 ntBASIC5.56□□□□□ -1.52
ATF4P18848 AL355472.4-201ENST00000610233 626 ntBASIC5.56□□□□□ -1.52
ATF4P18848 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.56□□□□□ -1.52
ATF4P18848 AC023310.4-201ENST00000613130 650 ntBASIC5.56□□□□□ -1.52
ATF4P18848 AL049794.2-201ENST00000616301 365 ntBASIC5.56□□□□□ -1.52
ATF4P18848 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC5.56□□□□□ -1.52
ATF4P18848 AC006338.1-201ENST00000618453 749 ntBASIC5.56□□□□□ -1.52
ATF4P18848 AC090527.3-201ENST00000619041 548 ntBASIC5.56□□□□□ -1.52
ATF4P18848 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC5.56□□□□□ -1.52
ATF4P18848 AC091953.2-201ENST00000623979 160 ntBASIC5.56□□□□□ -1.52
ATF4P18848 AC019226.1-201ENST00000625666 515 ntBASIC5.56□□□□□ -1.52
ATF4P18848 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ATF4P18848 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.56□□□□□ -1.52
ATF4P18848 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
ATF4P18848 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ATF4P18848 AC093849.1-201ENST00000563631 2209 ntBASIC5.56□□□□□ -1.52
ATF4P18848 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ATF4P18848 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
ATF4P18848 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ATF4P18848 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.56□□□□□ -1.52
ATF4P18848 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms