Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ATF1P18846 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ATF1P18846 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ATF1P18846 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ATF1P18846 AL445437.1-201ENST00000623157 3087 ntBASIC3.63□□□□□ -1.83
ATF1P18846 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
ATF1P18846 AL627171.1-201ENST00000618845 1308 ntBASIC3.63□□□□□ -1.83
ATF1P18846 AC092162.3-201ENST00000624511 1624 ntBASIC3.62□□□□□ -1.83
ATF1P18846 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATF1P18846 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATF1P18846 AC025031.4-201ENST00000621248 3271 ntBASIC3.62□□□□□ -1.83
ATF1P18846 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATF1P18846 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ATF1P18846 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATF1P18846 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATF1P18846 AL049555.1-201ENST00000562834 1933 ntBASIC3.62□□□□□ -1.83
ATF1P18846 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATF1P18846 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.62□□□□□ -1.83
ATF1P18846 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATF1P18846 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.62□□□□□ -1.83
ATF1P18846 RNU6-1279P-201ENST00000383917 103 ntBASIC3.62□□□□□ -1.83
ATF1P18846 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.62□□□□□ -1.83
ATF1P18846 RPS3AP23-201ENST00000401762 784 ntBASIC3.62□□□□□ -1.83
ATF1P18846 RPS16P5-201ENST00000406501 404 ntBASIC3.62□□□□□ -1.83
ATF1P18846 PGBD4P8-201ENST00000412993 562 ntBASIC3.62□□□□□ -1.83
ATF1P18846 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC3.62□□□□□ -1.83
ATF1P18846 AC069213.2-201ENST00000420238 366 ntBASIC3.62□□□□□ -1.83
ATF1P18846 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.62□□□□□ -1.83
ATF1P18846 RPL23AP1-201ENST00000428990 471 ntBASIC3.62□□□□□ -1.83
ATF1P18846 RPL7P4-203ENST00000430239 730 ntBASIC3.62□□□□□ -1.83
ATF1P18846 SERPINA7P1-201ENST00000443077 631 ntBASIC3.62□□□□□ -1.83
ATF1P18846 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.62□□□□□ -1.83
ATF1P18846 AC005229.2-201ENST00000456995 399 ntBASIC3.62□□□□□ -1.83
ATF1P18846 RPL7P32-201ENST00000457119 744 ntBASIC3.62□□□□□ -1.83
ATF1P18846 MTND2P28-201ENST00000457540 1044 ntBASIC3.62□□□□□ -1.83
ATF1P18846 RN7SL98P-201ENST00000462271 300 ntBASIC3.62□□□□□ -1.83
ATF1P18846 RPS27AP16-201ENST00000492222 470 ntBASIC3.62□□□□□ -1.83
ATF1P18846 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.62□□□□□ -1.83
ATF1P18846 PRELID3BP7-201ENST00000503606 469 ntBASIC3.62□□□□□ -1.83
ATF1P18846 HAUS1P1-201ENST00000505275 832 ntBASIC3.62□□□□□ -1.83
ATF1P18846 MIR2114-201ENST00000516645 80 ntBASIC3.62□□□□□ -1.83
ATF1P18846 RN7SKP92-201ENST00000517266 244 ntBASIC3.62□□□□□ -1.83
ATF1P18846 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.62□□□□□ -1.83
ATF1P18846 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.62□□□□□ -1.83
ATF1P18846 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.62□□□□□ -1.83
ATF1P18846 AC079171.1-201ENST00000568788 914 ntBASIC3.62□□□□□ -1.83
ATF1P18846 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
ATF1P18846 AC093765.1-201ENST00000603758 881 ntBASIC3.62□□□□□ -1.83
ATF1P18846 AC104662.1-201ENST00000604448 511 ntBASIC3.62□□□□□ -1.83
ATF1P18846 AC090948.1-201ENST00000607464 549 ntBASIC3.62□□□□□ -1.83
ATF1P18846 AL021707.7-201ENST00000607991 416 ntBASIC3.62□□□□□ -1.83
ATF1P18846 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.62□□□□□ -1.83
ATF1P18846 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.62□□□□□ -1.83
ATF1P18846 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.62□□□□□ -1.83
ATF1P18846 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
ATF1P18846 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
ATF1P18846 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
ATF1P18846 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.62□□□□□ -1.83
ATF1P18846 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATF1P18846 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ATF1P18846 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
ATF1P18846 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.62□□□□□ -1.83
ATF1P18846 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ATF1P18846 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ATF1P18846 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.61□□□□□ -1.83
ATF1P18846 EIF2AP4-201ENST00000424793 1781 ntBASIC3.61□□□□□ -1.83
ATF1P18846 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.61□□□□□ -1.83
ATF1P18846 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
ATF1P18846 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ATF1P18846 RNA5SP36-201ENST00000410197 133 ntBASIC3.61□□□□□ -1.83
ATF1P18846 RN7SKP235-201ENST00000410662 305 ntBASIC3.61□□□□□ -1.83
ATF1P18846 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ATF1P18846 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.61□□□□□ -1.83
ATF1P18846 MFSD13B-201ENST00000420133 1290 ntBASIC3.61□□□□□ -1.83
ATF1P18846 AC007394.1-201ENST00000421941 531 ntBASIC3.61□□□□□ -1.83
ATF1P18846 AC073464.3-201ENST00000422564 712 ntBASIC3.61□□□□□ -1.83
ATF1P18846 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC3.61□□□□□ -1.83
ATF1P18846 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.61□□□□□ -1.83
ATF1P18846 DPY19L1P2-201ENST00000426647 915 ntBASIC3.61□□□□□ -1.83
ATF1P18846 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.61□□□□□ -1.83
ATF1P18846 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.61□□□□□ -1.83
ATF1P18846 VN1R25P-201ENST00000443385 738 ntBASIC3.61□□□□□ -1.83
ATF1P18846 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.61□□□□□ -1.83
ATF1P18846 EEF1A1P1-201ENST00000447052 739 ntBASIC3.61□□□□□ -1.83
ATF1P18846 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.61□□□□□ -1.83
ATF1P18846 VN1R40P-201ENST00000455196 941 ntBASIC3.61□□□□□ -1.83
ATF1P18846 RPL31P53-201ENST00000457065 348 ntBASIC3.61□□□□□ -1.83
ATF1P18846 RPL35AP28-201ENST00000459730 331 ntBASIC3.61□□□□□ -1.83
ATF1P18846 PPIAP21-201ENST00000464473 501 ntBASIC3.61□□□□□ -1.83
ATF1P18846 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.61□□□□□ -1.83
ATF1P18846 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.61□□□□□ -1.83
ATF1P18846 RPL23AP72-201ENST00000492447 435 ntBASIC3.61□□□□□ -1.83
ATF1P18846 RN7SL810P-201ENST00000493031 276 ntBASIC3.61□□□□□ -1.83
ATF1P18846 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.61□□□□□ -1.83
ATF1P18846 AC010342.1-201ENST00000514047 877 ntBASIC3.61□□□□□ -1.83
ATF1P18846 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.61□□□□□ -1.83
ATF1P18846 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.61□□□□□ -1.83
ATF1P18846 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ATF1P18846 AC084757.1-201ENST00000559987 490 ntBASIC3.61□□□□□ -1.83
ATF1P18846 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms