Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 RNU4-7P-201ENST00000364758 141 ntBASIC4.14□□□□□ -1.75
HOXC4P09017 RNA5SP372-201ENST00000390836 115 ntBASIC4.14□□□□□ -1.75
HOXC4P09017 PPIAP31-201ENST00000405422 495 ntBASIC4.14□□□□□ -1.75
HOXC4P09017 AL136131.1-201ENST00000406079 803 ntBASIC4.14□□□□□ -1.75
HOXC4P09017 MIR1193-201ENST00000408109 78 ntBASIC4.14□□□□□ -1.75
HOXC4P09017 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.14□□□□□ -1.75
HOXC4P09017 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HOXC4P09017 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.14□□□□□ -1.75
HOXC4P09017 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.14□□□□□ -1.75
HOXC4P09017 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.14□□□□□ -1.75
HOXC4P09017 RPS29P19-201ENST00000479709 171 ntBASIC4.14□□□□□ -1.75
HOXC4P09017 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.14□□□□□ -1.75
HOXC4P09017 NDUFB4P12-201ENST00000513465 390 ntBASIC4.14□□□□□ -1.75
HOXC4P09017 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.14□□□□□ -1.75
HOXC4P09017 AC008676.3-201ENST00000521237 435 ntBASIC4.14□□□□□ -1.75
HOXC4P09017 AC109635.6-201ENST00000525487 1113 ntBASIC4.14□□□□□ -1.75
HOXC4P09017 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.14□□□□□ -1.75
HOXC4P09017 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXC4P09017 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HOXC4P09017 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXC4P09017 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.14□□□□□ -1.75
HOXC4P09017 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.14□□□□□ -1.75
HOXC4P09017 AC067959.1-201ENST00000604334 379 ntBASIC4.14□□□□□ -1.75
HOXC4P09017 AC023813.4-201ENST00000607580 580 ntBASIC4.14□□□□□ -1.75
HOXC4P09017 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXC4P09017 MIR6867-201ENST00000610636 67 ntBASIC4.14□□□□□ -1.75
HOXC4P09017 AC006213.5-201ENST00000619673 288 ntBASIC4.14□□□□□ -1.75
HOXC4P09017 RMST_9.1-201ENST00000619945 193 ntBASIC4.14□□□□□ -1.75
HOXC4P09017 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.14□□□□□ -1.75
HOXC4P09017 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
HOXC4P09017 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXC4P09017 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXC4P09017 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXC4P09017 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.14□□□□□ -1.75
HOXC4P09017 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HOXC4P09017 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXC4P09017 AL672167.1-205ENST00000641112 3080 ntBASIC4.13□□□□□ -1.75
HOXC4P09017 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
HOXC4P09017 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.13□□□□□ -1.75
HOXC4P09017 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.13□□□□□ -1.75
HOXC4P09017 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HOXC4P09017 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HOXC4P09017 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.13□□□□□ -1.75
HOXC4P09017 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXC4P09017 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXC4P09017 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HOXC4P09017 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HOXC4P09017 OR8G2P-201ENST00000412796 908 ntBASIC4.13□□□□□ -1.75
HOXC4P09017 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC4.13□□□□□ -1.75
HOXC4P09017 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HOXC4P09017 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXC4P09017 AC073335.1-201ENST00000427776 363 ntBASIC4.13□□□□□ -1.75
HOXC4P09017 AC012497.1-201ENST00000429392 575 ntBASIC4.13□□□□□ -1.75
HOXC4P09017 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.13□□□□□ -1.75
HOXC4P09017 AC069285.2-201ENST00000440210 275 ntBASIC4.13□□□□□ -1.75
HOXC4P09017 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXC4P09017 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXC4P09017 AL035551.1-201ENST00000446931 348 ntBASIC4.13□□□□□ -1.75
HOXC4P09017 AL162388.1-201ENST00000450912 352 ntBASIC4.13□□□□□ -1.75
HOXC4P09017 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXC4P09017 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.13□□□□□ -1.75
HOXC4P09017 AL132838.2-201ENST00000492041 314 ntBASIC4.13□□□□□ -1.75
HOXC4P09017 RN7SL604P-201ENST00000492589 296 ntBASIC4.13□□□□□ -1.75
HOXC4P09017 RPS6P4-201ENST00000494693 758 ntBASIC4.13□□□□□ -1.75
HOXC4P09017 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXC4P09017 SNORA48.9-201ENST00000516419 162 ntBASIC4.13□□□□□ -1.75
HOXC4P09017 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXC4P09017 OR8R1P-201ENST00000543943 764 ntBASIC4.13□□□□□ -1.75
HOXC4P09017 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXC4P09017 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXC4P09017 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXC4P09017 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HOXC4P09017 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXC4P09017 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.13□□□□□ -1.75
HOXC4P09017 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXC4P09017 RNU4-89P-201ENST00000607443 133 ntBASIC4.13□□□□□ -1.75
HOXC4P09017 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXC4P09017 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.13□□□□□ -1.75
HOXC4P09017 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
HOXC4P09017 AC017104.4-201ENST00000636283 1592 ntBASIC4.13□□□□□ -1.75
HOXC4P09017 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
HOXC4P09017 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXC4P09017 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXC4P09017 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXC4P09017 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
HOXC4P09017 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HOXC4P09017 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXC4P09017 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
HOXC4P09017 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXC4P09017 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.12□□□□□ -1.75
HOXC4P09017 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
HOXC4P09017 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
HOXC4P09017 RNU6-984P-201ENST00000363236 109 ntBASIC4.12□□□□□ -1.75
HOXC4P09017 RNA5SP479-201ENST00000364858 117 ntBASIC4.12□□□□□ -1.75
HOXC4P09017 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HOXC4P09017 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXC4P09017 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXC4P09017 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXC4P09017 SKP1P3-201ENST00000429280 487 ntBASIC4.12□□□□□ -1.75
HOXC4P09017 VDAC1P6-201ENST00000430062 855 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms