Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
MMP3P08254 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.06□□□□□ -1.6
MMP3P08254 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
MMP3P08254 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
MMP3P08254 AC100778.3-201ENST00000580060 1750 ntBASIC5.06□□□□□ -1.6
MMP3P08254 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.06□□□□□ -1.6
MMP3P08254 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.06□□□□□ -1.6
MMP3P08254 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.06□□□□□ -1.6
MMP3P08254 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
MMP3P08254 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
MMP3P08254 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
MMP3P08254 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
MMP3P08254 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
MMP3P08254 CPHL1P-201ENST00000461341 3407 ntBASIC5.05□□□□□ -1.6
MMP3P08254 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
MMP3P08254 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
MMP3P08254 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.05□□□□□ -1.6
MMP3P08254 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.05□□□□□ -1.6
MMP3P08254 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.05□□□□□ -1.6
MMP3P08254 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC5.05□□□□□ -1.6
MMP3P08254 AC023128.2-201ENST00000420880 1223 ntBASIC5.05□□□□□ -1.6
MMP3P08254 RAD23BP1-201ENST00000421404 1227 ntBASIC5.05□□□□□ -1.6
MMP3P08254 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.05□□□□□ -1.6
MMP3P08254 HSPE1P16-201ENST00000426640 348 ntBASIC5.05□□□□□ -1.6
MMP3P08254 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.05□□□□□ -1.6
MMP3P08254 KCTD10P1-201ENST00000434203 625 ntBASIC5.05□□□□□ -1.6
MMP3P08254 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.05□□□□□ -1.6
MMP3P08254 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.05□□□□□ -1.6
MMP3P08254 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.05□□□□□ -1.6
MMP3P08254 ARF4P4-201ENST00000439608 520 ntBASIC5.05□□□□□ -1.6
MMP3P08254 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC5.05□□□□□ -1.6
MMP3P08254 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.05□□□□□ -1.6
MMP3P08254 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC5.05□□□□□ -1.6
MMP3P08254 ELOCP13-201ENST00000443934 329 ntBASIC5.05□□□□□ -1.6
MMP3P08254 PHBP16-201ENST00000446318 950 ntBASIC5.05□□□□□ -1.6
MMP3P08254 RPL23AP43-201ENST00000446445 471 ntBASIC5.05□□□□□ -1.6
MMP3P08254 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.05□□□□□ -1.6
MMP3P08254 NUTF2P3-201ENST00000448540 384 ntBASIC5.05□□□□□ -1.6
MMP3P08254 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.05□□□□□ -1.6
MMP3P08254 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
MMP3P08254 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.05□□□□□ -1.6
MMP3P08254 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.05□□□□□ -1.6
MMP3P08254 RNA5SP249-201ENST00000516127 99 ntBASIC5.05□□□□□ -1.6
MMP3P08254 RN7SKP141-201ENST00000516167 338 ntBASIC5.05□□□□□ -1.6
MMP3P08254 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.05□□□□□ -1.6
MMP3P08254 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.05□□□□□ -1.6
MMP3P08254 EEF1A1P37-201ENST00000522748 715 ntBASIC5.05□□□□□ -1.6
MMP3P08254 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
MMP3P08254 AC109635.6-201ENST00000525487 1113 ntBASIC5.05□□□□□ -1.6
MMP3P08254 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC5.05□□□□□ -1.6
MMP3P08254 PSMB7P1-201ENST00000556349 514 ntBASIC5.05□□□□□ -1.6
MMP3P08254 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.05□□□□□ -1.6
MMP3P08254 MTND3P12-201ENST00000559068 328 ntBASIC5.05□□□□□ -1.6
MMP3P08254 AC009712.1-201ENST00000564938 316 ntBASIC5.05□□□□□ -1.6
MMP3P08254 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.05□□□□□ -1.6
MMP3P08254 MIR4789-201ENST00000577469 82 ntBASIC5.05□□□□□ -1.6
MMP3P08254 AC068313.1-201ENST00000604028 1008 ntBASIC5.05□□□□□ -1.6
MMP3P08254 AP002802.2-201ENST00000605877 235 ntBASIC5.05□□□□□ -1.6
MMP3P08254 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.05□□□□□ -1.6
MMP3P08254 AC009974.1-201ENST00000608881 455 ntBASIC5.05□□□□□ -1.6
MMP3P08254 AC093673.2-201ENST00000609674 331 ntBASIC5.05□□□□□ -1.6
MMP3P08254 AP004607.9-201ENST00000618202 316 ntBASIC5.05□□□□□ -1.6
MMP3P08254 AC074140.1-201ENST00000621617 208 ntBASIC5.05□□□□□ -1.6
MMP3P08254 AC006963.1-201ENST00000624003 1052 ntBASIC5.05□□□□□ -1.6
MMP3P08254 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.05□□□□□ -1.6
MMP3P08254 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.05□□□□□ -1.6
MMP3P08254 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
MMP3P08254 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
MMP3P08254 CASC19-206ENST00000641028 1430 ntBASIC5.05□□□□□ -1.6
MMP3P08254 AC097461.1-201ENST00000568928 2821 ntBASIC5.05□□□□□ -1.6
MMP3P08254 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
MMP3P08254 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
MMP3P08254 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
MMP3P08254 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
MMP3P08254 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
MMP3P08254 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
MMP3P08254 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
MMP3P08254 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
MMP3P08254 HSPD1P11-201ENST00000508643 1702 ntBASIC5.04□□□□□ -1.6
MMP3P08254 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
MMP3P08254 OR5P1P-201ENST00000299512 925 ntBASIC5.04□□□□□ -1.6
MMP3P08254 SNORA70C-201ENST00000384538 135 ntBASIC5.04□□□□□ -1.6
MMP3P08254 SNORA57.1-201ENST00000391227 145 ntBASIC5.04□□□□□ -1.6
MMP3P08254 AF228730.1-201ENST00000397972 663 ntBASIC5.04□□□□□ -1.6
MMP3P08254 ZNF602P-201ENST00000405929 924 ntBASIC5.04□□□□□ -1.6
MMP3P08254 RN7SKP199-201ENST00000410325 305 ntBASIC5.04□□□□□ -1.6
MMP3P08254 RN7SKP263-201ENST00000411194 309 ntBASIC5.04□□□□□ -1.6
MMP3P08254 UBE2V1P9-201ENST00000414760 368 ntBASIC5.04□□□□□ -1.6
MMP3P08254 AL449283.1-202ENST00000418249 604 ntBASIC5.04□□□□□ -1.6
MMP3P08254 RPS27AP12-201ENST00000429552 465 ntBASIC5.04□□□□□ -1.6
MMP3P08254 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.04□□□□□ -1.6
MMP3P08254 AC092447.2-201ENST00000435487 669 ntBASIC5.04□□□□□ -1.6
MMP3P08254 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
MMP3P08254 AC104651.2-201ENST00000447549 528 ntBASIC5.04□□□□□ -1.6
MMP3P08254 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.04□□□□□ -1.6
MMP3P08254 MTND2P8-201ENST00000450555 1025 ntBASIC5.04□□□□□ -1.6
MMP3P08254 DHFRP3-201ENST00000455595 559 ntBASIC5.04□□□□□ -1.6
MMP3P08254 RPL7P32-201ENST00000457119 744 ntBASIC5.04□□□□□ -1.6
MMP3P08254 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.04□□□□□ -1.6
MMP3P08254 AC053481.1-201ENST00000467217 306 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 263.2 ms