Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.8□□□□□ -1.64
COL2A1P02458 AC091516.1-201ENST00000549191 703 ntBASIC4.8□□□□□ -1.64
COL2A1P02458 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.8□□□□□ -1.64
COL2A1P02458 RPL21P12-201ENST00000559810 515 ntBASIC4.8□□□□□ -1.64
COL2A1P02458 AC027807.1-201ENST00000559921 996 ntBASIC4.8□□□□□ -1.64
COL2A1P02458 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.8□□□□□ -1.64
COL2A1P02458 AC138907.10-201ENST00000623708 983 ntBASIC4.8□□□□□ -1.64
COL2A1P02458 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.8□□□□□ -1.64
COL2A1P02458 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
COL2A1P02458 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL2A1P02458 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.79□□□□□ -1.64
COL2A1P02458 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
COL2A1P02458 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL2A1P02458 YES1-203ENST00000577961 4554 ntTSL 5 BASIC4.79□□□□□ -1.64
COL2A1P02458 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL2A1P02458 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.79□□□□□ -1.64
COL2A1P02458 RN7SKP177-201ENST00000410567 355 ntBASIC4.79□□□□□ -1.64
COL2A1P02458 AL356806.1-201ENST00000422524 916 ntBASIC4.79□□□□□ -1.64
COL2A1P02458 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.79□□□□□ -1.64
COL2A1P02458 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.79□□□□□ -1.64
COL2A1P02458 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.79□□□□□ -1.64
COL2A1P02458 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.79□□□□□ -1.64
COL2A1P02458 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL2A1P02458 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.79□□□□□ -1.64
COL2A1P02458 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.79□□□□□ -1.64
COL2A1P02458 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC4.79□□□□□ -1.64
COL2A1P02458 RNU6-513P-201ENST00000516104 104 ntBASIC4.79□□□□□ -1.64
COL2A1P02458 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.79□□□□□ -1.64
COL2A1P02458 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.79□□□□□ -1.64
COL2A1P02458 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL2A1P02458 HSPE1P5-201ENST00000561489 272 ntBASIC4.79□□□□□ -1.64
COL2A1P02458 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.79□□□□□ -1.64
COL2A1P02458 AC010487.1-201ENST00000594408 1172 ntBASIC4.79□□□□□ -1.64
COL2A1P02458 AL606490.9-201ENST00000603331 271 ntBASIC4.79□□□□□ -1.64
COL2A1P02458 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.79□□□□□ -1.64
COL2A1P02458 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.79□□□□□ -1.64
COL2A1P02458 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL2A1P02458 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL2A1P02458 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
COL2A1P02458 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
COL2A1P02458 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL2A1P02458 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.79□□□□□ -1.64
COL2A1P02458 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL2A1P02458 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
COL2A1P02458 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL2A1P02458 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL2A1P02458 AL929601.4-201ENST00000613011 1341 ntBASIC4.78□□□□□ -1.64
COL2A1P02458 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL2A1P02458 Y_RNA.111-201ENST00000363248 100 ntBASIC4.78□□□□□ -1.64
COL2A1P02458 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.78□□□□□ -1.64
COL2A1P02458 SETP10-201ENST00000424368 814 ntBASIC4.78□□□□□ -1.64
COL2A1P02458 RSL24D1P8-201ENST00000434442 492 ntBASIC4.78□□□□□ -1.64
COL2A1P02458 TMX2P1-201ENST00000436507 708 ntBASIC4.78□□□□□ -1.64
COL2A1P02458 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.78□□□□□ -1.64
COL2A1P02458 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.78□□□□□ -1.64
COL2A1P02458 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.78□□□□□ -1.64
COL2A1P02458 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.78□□□□□ -1.64
COL2A1P02458 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.78□□□□□ -1.64
COL2A1P02458 COL6A4P2-205ENST00000509855 506 ntBASIC4.78□□□□□ -1.64
COL2A1P02458 RNU7-143P-201ENST00000516781 65 ntBASIC4.78□□□□□ -1.64
COL2A1P02458 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.78□□□□□ -1.64
COL2A1P02458 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL2A1P02458 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.78□□□□□ -1.64
COL2A1P02458 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.78□□□□□ -1.64
COL2A1P02458 AC016542.1-201ENST00000608259 493 ntBASIC4.78□□□□□ -1.64
COL2A1P02458 AC019176.2-201ENST00000611579 315 ntBASIC4.78□□□□□ -1.64
COL2A1P02458 AC015922.4-201ENST00000612568 690 ntBASIC4.78□□□□□ -1.64
COL2A1P02458 AC003001.2-201ENST00000616294 831 ntBASIC4.78□□□□□ -1.64
COL2A1P02458 AC015967.1-201ENST00000619893 476 ntBASIC4.78□□□□□ -1.64
COL2A1P02458 AL354798.1-201ENST00000622505 329 ntBASIC4.78□□□□□ -1.64
COL2A1P02458 AL163152.1-201ENST00000642001 374 ntBASIC4.78□□□□□ -1.64
COL2A1P02458 SMG1P4-204ENST00000523028 4131 ntBASIC4.78□□□□□ -1.64
COL2A1P02458 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.78□□□□□ -1.64
COL2A1P02458 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL2A1P02458 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL2A1P02458 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL2A1P02458 AC005261.2-201ENST00000593427 4258 ntBASIC4.78□□□□□ -1.64
COL2A1P02458 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL2A1P02458 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.78□□□□□ -1.64
COL2A1P02458 AL672167.1-203ENST00000641299 2975 ntBASIC4.78□□□□□ -1.64
COL2A1P02458 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.78□□□□□ -1.65
COL2A1P02458 AC073346.2-201ENST00000624724 2058 ntBASIC4.77□□□□□ -1.65
COL2A1P02458 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL2A1P02458 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL2A1P02458 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL2A1P02458 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.77□□□□□ -1.65
COL2A1P02458 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL2A1P02458 AC067945.1-201ENST00000342609 618 ntBASIC4.77□□□□□ -1.65
COL2A1P02458 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL2A1P02458 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.77□□□□□ -1.65
COL2A1P02458 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.77□□□□□ -1.65
COL2A1P02458 AC083863.1-201ENST00000438811 231 ntBASIC4.77□□□□□ -1.65
COL2A1P02458 RPL23AP89-201ENST00000439324 255 ntBASIC4.77□□□□□ -1.65
COL2A1P02458 NOTCH2P1-201ENST00000443481 624 ntBASIC4.77□□□□□ -1.65
COL2A1P02458 NANOGP10-201ENST00000453325 895 ntBASIC4.77□□□□□ -1.65
COL2A1P02458 AC007967.1-201ENST00000455422 1159 ntBASIC4.77□□□□□ -1.65
COL2A1P02458 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COL2A1P02458 RPS20P21-201ENST00000466859 343 ntBASIC4.77□□□□□ -1.65
COL2A1P02458 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.77□□□□□ -1.65
COL2A1P02458 AC114322.1-201ENST00000506771 926 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms