Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL1A1P02452 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COL1A1P02452 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.77□□□□□ -1.65
COL1A1P02452 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.77□□□□□ -1.65
COL1A1P02452 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL1A1P02452 MIR30B-201ENST00000384850 88 ntBASIC4.77□□□□□ -1.65
COL1A1P02452 AC007066.1-201ENST00000392902 381 ntBASIC4.77□□□□□ -1.65
COL1A1P02452 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.77□□□□□ -1.65
COL1A1P02452 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.77□□□□□ -1.65
COL1A1P02452 HLA-N-201ENST00000437516 135 ntBASIC4.77□□□□□ -1.65
COL1A1P02452 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.77□□□□□ -1.65
COL1A1P02452 RPS3AP12-201ENST00000443616 753 ntBASIC4.77□□□□□ -1.65
COL1A1P02452 PDSS1P2-201ENST00000449397 678 ntBASIC4.77□□□□□ -1.65
COL1A1P02452 PPIAP15-201ENST00000479662 484 ntBASIC4.77□□□□□ -1.65
COL1A1P02452 AC093853.1-201ENST00000515689 483 ntBASIC4.77□□□□□ -1.65
COL1A1P02452 SNORA74D-201ENST00000516404 141 ntBASIC4.77□□□□□ -1.65
COL1A1P02452 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.77□□□□□ -1.65
COL1A1P02452 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.77□□□□□ -1.65
COL1A1P02452 SRGNP1-201ENST00000603392 451 ntBASIC4.77□□□□□ -1.65
COL1A1P02452 AL049634.3-201ENST00000604968 457 ntBASIC4.77□□□□□ -1.65
COL1A1P02452 AL160281.1-201ENST00000605307 311 ntBASIC4.77□□□□□ -1.65
COL1A1P02452 AC096577.2-201ENST00000611455 153 ntBASIC4.77□□□□□ -1.65
COL1A1P02452 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL1A1P02452 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL1A1P02452 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC4.77□□□□□ -1.65
COL1A1P02452 AC032011.1-201ENST00000611703 1549 ntBASIC4.77□□□□□ -1.65
COL1A1P02452 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.77□□□□□ -1.65
COL1A1P02452 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL1A1P02452 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
COL1A1P02452 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COL1A1P02452 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
COL1A1P02452 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL1A1P02452 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COL1A1P02452 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.76□□□□□ -1.65
COL1A1P02452 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.76□□□□□ -1.65
COL1A1P02452 RPL21P17-201ENST00000397467 475 ntBASIC4.76□□□□□ -1.65
COL1A1P02452 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.76□□□□□ -1.65
COL1A1P02452 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.76□□□□□ -1.65
COL1A1P02452 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.76□□□□□ -1.65
COL1A1P02452 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.76□□□□□ -1.65
COL1A1P02452 RPS17P13-201ENST00000448974 407 ntBASIC4.76□□□□□ -1.65
COL1A1P02452 RPL7P24-201ENST00000493052 752 ntBASIC4.76□□□□□ -1.65
COL1A1P02452 RNU1-95P-201ENST00000516357 160 ntBASIC4.76□□□□□ -1.65
COL1A1P02452 RNU1-128P-201ENST00000516704 160 ntBASIC4.76□□□□□ -1.65
COL1A1P02452 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.76□□□□□ -1.65
COL1A1P02452 OR5M7P-201ENST00000526140 972 ntBASIC4.76□□□□□ -1.65
COL1A1P02452 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.76□□□□□ -1.65
COL1A1P02452 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
COL1A1P02452 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.76□□□□□ -1.65
COL1A1P02452 AC233702.9-201ENST00000581528 203 ntBASIC4.76□□□□□ -1.65
COL1A1P02452 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COL1A1P02452 AC104662.1-201ENST00000604448 511 ntBASIC4.76□□□□□ -1.65
COL1A1P02452 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL1A1P02452 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
COL1A1P02452 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COL1A1P02452 AP004289.2-201ENST00000444413 1457 ntBASIC4.76□□□□□ -1.65
COL1A1P02452 AC120036.2-201ENST00000509729 1474 ntBASIC4.76□□□□□ -1.65
COL1A1P02452 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL1A1P02452 AC233968.1-201ENST00000611212 1300 ntBASIC4.76□□□□□ -1.65
COL1A1P02452 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COL1A1P02452 Z95331.1-201ENST00000623075 23112 ntBASIC4.76□□□□□ -1.65
COL1A1P02452 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL1A1P02452 RNA5SP97-201ENST00000365006 84 ntBASIC4.75□□□□□ -1.65
COL1A1P02452 SOD2P1-201ENST00000396543 562 ntBASIC4.75□□□□□ -1.65
COL1A1P02452 AC233289.1-201ENST00000403700 508 ntBASIC4.75□□□□□ -1.65
COL1A1P02452 AC092647.1-201ENST00000420654 287 ntBASIC4.75□□□□□ -1.65
COL1A1P02452 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.75□□□□□ -1.65
COL1A1P02452 AL139247.1-201ENST00000422768 325 ntBASIC4.75□□□□□ -1.65
COL1A1P02452 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.75□□□□□ -1.65
COL1A1P02452 AL451050.1-201ENST00000450126 415 ntBASIC4.75□□□□□ -1.65
COL1A1P02452 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.75□□□□□ -1.65
COL1A1P02452 STMN1P2-201ENST00000508435 439 ntBASIC4.75□□□□□ -1.65
COL1A1P02452 PPBPP1-201ENST00000510807 373 ntBASIC4.75□□□□□ -1.65
COL1A1P02452 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.75□□□□□ -1.65
COL1A1P02452 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL1A1P02452 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.75□□□□□ -1.65
COL1A1P02452 AC068020.1-201ENST00000594215 661 ntBASIC4.75□□□□□ -1.65
COL1A1P02452 AC012468.1-201ENST00000604888 430 ntBASIC4.75□□□□□ -1.65
COL1A1P02452 AC005972.3-201ENST00000606304 481 ntBASIC4.75□□□□□ -1.65
COL1A1P02452 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.75□□□□□ -1.65
COL1A1P02452 Xist_exon4.1-201ENST00000615964 126 ntBASIC4.75□□□□□ -1.65
COL1A1P02452 AL773545.4-201ENST00000637262 310 ntBASIC4.75□□□□□ -1.65
COL1A1P02452 AL513478.4-201ENST00000641636 310 ntBASIC4.75□□□□□ -1.65
COL1A1P02452 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.75□□□□□ -1.65
COL1A1P02452 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
COL1A1P02452 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL1A1P02452 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
COL1A1P02452 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
COL1A1P02452 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL1A1P02452 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL1A1P02452 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL1A1P02452 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.75□□□□□ -1.65
COL1A1P02452 OR51C1P-202ENST00000641159 1444 ntBASIC4.75□□□□□ -1.65
COL1A1P02452 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL1A1P02452 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
COL1A1P02452 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL1A1P02452 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.75□□□□□ -1.65
COL1A1P02452 TRIM60P17-201ENST00000415181 719 ntBASIC4.75□□□□□ -1.65
COL1A1P02452 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.75□□□□□ -1.65
COL1A1P02452 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms