Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC188H7C350 ABCF2P2-201ENST00000450549 296 ntBASIC4.65□□□□□ -1.67
CCDC188H7C350 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC188H7C350 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC188H7C350 RPL32P14-201ENST00000463196 378 ntBASIC4.65□□□□□ -1.67
CCDC188H7C350 SETP6-201ENST00000479329 568 ntBASIC4.65□□□□□ -1.67
CCDC188H7C350 OR5H3P-201ENST00000502817 919 ntBASIC4.65□□□□□ -1.67
CCDC188H7C350 BTF3P13-201ENST00000513224 490 ntBASIC4.65□□□□□ -1.67
CCDC188H7C350 RNU2-30P-201ENST00000516209 141 ntBASIC4.65□□□□□ -1.67
CCDC188H7C350 HMGB1P1-201ENST00000522557 636 ntBASIC4.65□□□□□ -1.67
CCDC188H7C350 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC188H7C350 AC092451.2-201ENST00000538746 658 ntBASIC4.65□□□□□ -1.67
CCDC188H7C350 AC008033.2-201ENST00000542626 177 ntBASIC4.65□□□□□ -1.67
CCDC188H7C350 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC188H7C350 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC188H7C350 AC090751.1-201ENST00000566966 267 ntBASIC4.65□□□□□ -1.67
CCDC188H7C350 MIR3691-201ENST00000578066 90 ntBASIC4.65□□□□□ -1.67
CCDC188H7C350 NF1P5-201ENST00000588287 448 ntBASIC4.65□□□□□ -1.67
CCDC188H7C350 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.65□□□□□ -1.67
CCDC188H7C350 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CCDC188H7C350 AL121612.2-201ENST00000612261 482 ntBASIC4.65□□□□□ -1.67
CCDC188H7C350 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC188H7C350 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC188H7C350 AC006249.1-201ENST00000621223 471 ntBASIC4.65□□□□□ -1.67
CCDC188H7C350 AC095038.2-201ENST00000621464 1070 ntBASIC4.65□□□□□ -1.67
CCDC188H7C350 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC188H7C350 ATE1-AS1-202ENST00000636460 506 ntBASIC4.65□□□□□ -1.67
CCDC188H7C350 NOL8P1-201ENST00000508336 3529 ntBASIC4.65□□□□□ -1.67
CCDC188H7C350 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
CCDC188H7C350 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC188H7C350 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC188H7C350 AC092162.3-201ENST00000624511 1624 ntBASIC4.64□□□□□ -1.67
CCDC188H7C350 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CCDC188H7C350 AC006971.1-201ENST00000407916 4486 ntBASIC4.64□□□□□ -1.67
CCDC188H7C350 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC188H7C350 AC100871.1-201ENST00000507871 1456 ntBASIC4.64□□□□□ -1.67
CCDC188H7C350 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CCDC188H7C350 AC053481.2-202ENST00000582394 1500 ntBASIC4.64□□□□□ -1.67
CCDC188H7C350 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC188H7C350 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC188H7C350 AL445183.3-201ENST00000414168 502 ntBASIC4.64□□□□□ -1.67
CCDC188H7C350 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC188H7C350 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC188H7C350 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC188H7C350 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC188H7C350 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC188H7C350 RPL37P3-201ENST00000456825 293 ntBASIC4.64□□□□□ -1.67
CCDC188H7C350 TPT1P3-201ENST00000492841 512 ntBASIC4.64□□□□□ -1.67
CCDC188H7C350 AC104108.1-201ENST00000509930 412 ntBASIC4.64□□□□□ -1.67
CCDC188H7C350 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC188H7C350 RNA5SP497-201ENST00000516081 97 ntBASIC4.64□□□□□ -1.67
CCDC188H7C350 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC188H7C350 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC188H7C350 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC188H7C350 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC188H7C350 AP001880.2-201ENST00000538233 448 ntBASIC4.64□□□□□ -1.67
CCDC188H7C350 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC188H7C350 AP003717.3-201ENST00000544832 1180 ntBASIC4.64□□□□□ -1.67
CCDC188H7C350 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.64□□□□□ -1.67
CCDC188H7C350 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC188H7C350 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC188H7C350 MIR432-201ENST00000606207 94 ntBASIC4.64□□□□□ -1.67
CCDC188H7C350 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC188H7C350 AL021707.7-201ENST00000607991 416 ntBASIC4.64□□□□□ -1.67
CCDC188H7C350 AC092574.1-201ENST00000609771 420 ntBASIC4.64□□□□□ -1.67
CCDC188H7C350 MIR6798-201ENST00000612887 67 ntBASIC4.64□□□□□ -1.67
CCDC188H7C350 AC073569.3-201ENST00000619055 682 ntBASIC4.64□□□□□ -1.67
CCDC188H7C350 AL445528.2-201ENST00000620582 470 ntBASIC4.64□□□□□ -1.67
CCDC188H7C350 AC019278.1-201ENST00000623516 479 ntBASIC4.64□□□□□ -1.67
CCDC188H7C350 AP002799.1-201ENST00000623552 423 ntBASIC4.64□□□□□ -1.67
CCDC188H7C350 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC188H7C350 AC090971.4-201ENST00000560291 1800 ntBASIC4.64□□□□□ -1.67
CCDC188H7C350 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC188H7C350 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC188H7C350 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC188H7C350 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
CCDC188H7C350 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC188H7C350 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC188H7C350 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC188H7C350 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC188H7C350 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CCDC188H7C350 AL118496.1-201ENST00000440201 1812 ntBASIC4.63□□□□□ -1.67
CCDC188H7C350 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC188H7C350 AL592494.2-201ENST00000425455 1548 ntBASIC4.63□□□□□ -1.67
CCDC188H7C350 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CCDC188H7C350 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC188H7C350 RNA5SP305-201ENST00000362665 119 ntBASIC4.63□□□□□ -1.67
CCDC188H7C350 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC188H7C350 RNU6-171P-201ENST00000384354 107 ntBASIC4.63□□□□□ -1.67
CCDC188H7C350 MTATP6P31-201ENST00000406985 692 ntBASIC4.63□□□□□ -1.67
CCDC188H7C350 BX664727.1-201ENST00000416024 466 ntBASIC4.63□□□□□ -1.67
CCDC188H7C350 BX510359.2-201ENST00000417920 305 ntBASIC4.63□□□□□ -1.67
CCDC188H7C350 AC004552.1-201ENST00000419089 348 ntBASIC4.63□□□□□ -1.67
CCDC188H7C350 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC188H7C350 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.63□□□□□ -1.67
CCDC188H7C350 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC188H7C350 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC188H7C350 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC188H7C350 RPS26P3-201ENST00000470205 348 ntBASIC4.63□□□□□ -1.67
CCDC188H7C350 AC010683.1-201ENST00000473673 378 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms