Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
TMEM88BA6NKF7 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
TMEM88BA6NKF7 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
TMEM88BA6NKF7 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
TMEM88BA6NKF7 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
TMEM88BA6NKF7 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
TMEM88BA6NKF7 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.96□□□□□ -1.29
TMEM88BA6NKF7 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.96□□□□□ -1.29
TMEM88BA6NKF7 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.29
TMEM88BA6NKF7 AL034370.1-201ENST00000397254 1590 ntBASIC6.96□□□□□ -1.29
TMEM88BA6NKF7 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
TMEM88BA6NKF7 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 RNA5SP478-201ENST00000364657 115 ntBASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 AL078604.1-201ENST00000404609 466 ntBASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 NPM1P24-201ENST00000428039 894 ntBASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 RPL22P17-201ENST00000438729 315 ntBASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 ELOCP10-201ENST00000440624 327 ntBASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 RPS26P56-201ENST00000444468 240 ntBASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 FRG2FP-204ENST00000453982 852 ntBASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 Z82190.1-201ENST00000454534 490 ntBASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 RNU7-136P-201ENST00000458819 69 ntBASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 AC006511.1-201ENST00000470614 315 ntBASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 snoU109.6-201ENST00000516831 118 ntBASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 RPL21P5-201ENST00000554662 472 ntBASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 SLC25A36P1-201ENST00000590111 465 ntBASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 ELOCP34-201ENST00000604436 327 ntBASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 AL022394.1-201ENST00000606979 292 ntBASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 PISRT1-201ENST00000626175 531 ntBASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 MAPK10-270ENST00000641102 3538 ntBASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
TMEM88BA6NKF7 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 NBPF8-201ENST00000583271 5330 ntBASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 AC010329.2-201ENST00000595195 2737 ntBASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 ZNF33BP1-201ENST00000452497 1834 ntBASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 RNA5SP350-201ENST00000363298 111 ntBASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 MIR92A2-201ENST00000385299 75 ntBASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 MTCO3P40-201ENST00000392516 676 ntBASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 AL023807.1-201ENST00000407932 359 ntBASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 NMD3P2-201ENST00000421815 761 ntBASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 RPL23AP74-201ENST00000437246 471 ntBASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 AL121601.2-201ENST00000438019 707 ntBASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 OR7E125P-201ENST00000443450 846 ntBASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 AC026410.2-201ENST00000460281 156 ntBASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 RN7SL51P-201ENST00000468230 285 ntBASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 AC092989.1-201ENST00000481235 277 ntBASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 RN7SL346P-201ENST00000491561 294 ntBASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 KCTD9P5-201ENST00000504141 1170 ntBASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 AP003467.2-201ENST00000520175 319 ntBASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 OR5M2P-201ENST00000529003 936 ntBASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 AC079075.1-201ENST00000559543 878 ntBASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 RPL10P14-201ENST00000565265 298 ntBASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 MIR4260-201ENST00000583107 67 ntBASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 AC027229.1-201ENST00000583887 253 ntBASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC6.95□□□□□ -1.3
TMEM88BA6NKF7 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms