Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC138907.8-201ENST00000623981 2256 ntBASIC5.51□□□□□ -1.53
SHISA3A0PJX4 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 RN7SKP189-201ENST00000365042 330 ntBASIC5.51□□□□□ -1.53
SHISA3A0PJX4 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 MIR433-201ENST00000384837 93 ntBASIC5.51□□□□□ -1.53
SHISA3A0PJX4 MIR99A-201ENST00000384906 81 ntBASIC5.51□□□□□ -1.53
SHISA3A0PJX4 AL096800.1-201ENST00000405326 893 ntBASIC5.51□□□□□ -1.53
SHISA3A0PJX4 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 AL353777.1-201ENST00000425552 326 ntBASIC5.51□□□□□ -1.53
SHISA3A0PJX4 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.51□□□□□ -1.53
SHISA3A0PJX4 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 AC092601.1-201ENST00000444526 383 ntBASIC5.51□□□□□ -1.53
SHISA3A0PJX4 AL035551.1-201ENST00000446931 348 ntBASIC5.51□□□□□ -1.53
SHISA3A0PJX4 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.51□□□□□ -1.53
SHISA3A0PJX4 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 RPL31P50-201ENST00000471002 296 ntBASIC5.51□□□□□ -1.53
SHISA3A0PJX4 UOX-201ENST00000471089 899 ntBASIC5.51□□□□□ -1.53
SHISA3A0PJX4 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 RNU6-835P-201ENST00000516974 104 ntBASIC5.51□□□□□ -1.53
SHISA3A0PJX4 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 HMGB1P42-201ENST00000532126 553 ntBASIC5.51□□□□□ -1.53
SHISA3A0PJX4 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 AP002373.2-201ENST00000541631 1060 ntBASIC5.51□□□□□ -1.53
SHISA3A0PJX4 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 AC093027.1-201ENST00000546698 429 ntBASIC5.51□□□□□ -1.53
SHISA3A0PJX4 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 AC078814.3-201ENST00000553036 491 ntBASIC5.51□□□□□ -1.53
SHISA3A0PJX4 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 RN7SL208P-201ENST00000577964 296 ntBASIC5.51□□□□□ -1.53
SHISA3A0PJX4 AC011193.2-201ENST00000582638 367 ntBASIC5.51□□□□□ -1.53
SHISA3A0PJX4 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 NPIPB1P-202ENST00000588786 828 ntBASIC5.51□□□□□ -1.53
SHISA3A0PJX4 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 AP001429.1-201ENST00000602568 530 ntBASIC5.51□□□□□ -1.53
SHISA3A0PJX4 BX664608.1-201ENST00000610519 487 ntBASIC5.51□□□□□ -1.53
SHISA3A0PJX4 AL137000.1-201ENST00000610528 1244 ntBASIC5.51□□□□□ -1.53
SHISA3A0PJX4 DISC2.1-201ENST00000612827 205 ntBASIC5.51□□□□□ -1.53
SHISA3A0PJX4 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.51□□□□□ -1.53
SHISA3A0PJX4 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 AC010149.2-201ENST00000637608 315 ntBASIC5.51□□□□□ -1.53
SHISA3A0PJX4 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 AC025470.1-201ENST00000510053 2032 ntBASIC5.51□□□□□ -1.53
SHISA3A0PJX4 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
SHISA3A0PJX4 LINC00622-201ENST00000562811 1570 ntBASIC5.5□□□□□ -1.53
SHISA3A0PJX4 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.5□□□□□ -1.53
SHISA3A0PJX4 AL645937.1-201ENST00000641739 1652 ntBASIC5.5□□□□□ -1.53
SHISA3A0PJX4 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SHISA3A0PJX4 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SHISA3A0PJX4 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SHISA3A0PJX4 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
SHISA3A0PJX4 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SHISA3A0PJX4 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
SHISA3A0PJX4 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SHISA3A0PJX4 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SHISA3A0PJX4 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SHISA3A0PJX4 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
SHISA3A0PJX4 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.5□□□□□ -1.53
SHISA3A0PJX4 RNU6-984P-201ENST00000363236 109 ntBASIC5.5□□□□□ -1.53
SHISA3A0PJX4 RNU6-730P-201ENST00000383954 104 ntBASIC5.5□□□□□ -1.53
SHISA3A0PJX4 MIR431-201ENST00000385266 114 ntBASIC5.5□□□□□ -1.53
SHISA3A0PJX4 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.5□□□□□ -1.53
SHISA3A0PJX4 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC5.5□□□□□ -1.53
SHISA3A0PJX4 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC5.5□□□□□ -1.53
SHISA3A0PJX4 HMGB3P9-201ENST00000441799 583 ntBASIC5.5□□□□□ -1.53
SHISA3A0PJX4 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.5□□□□□ -1.53
SHISA3A0PJX4 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms