Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 AC074140.1-201ENST00000621617 208 ntBASIC4.2□□□□□ -1.74
TRBV5-4A0A0C4DH59 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.2□□□□□ -1.74
TRBV5-4A0A0C4DH59 AP000843.1-201ENST00000624880 701 ntBASIC4.2□□□□□ -1.74
TRBV5-4A0A0C4DH59 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.2□□□□□ -1.74
TRBV5-4A0A0C4DH59 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRBV5-4A0A0C4DH59 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRBV5-4A0A0C4DH59 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRBV5-4A0A0C4DH59 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRBV5-4A0A0C4DH59 MTCO1P4-201ENST00000520516 1409 ntBASIC4.2□□□□□ -1.74
TRBV5-4A0A0C4DH59 Z95327.2-201ENST00000414579 1873 ntBASIC4.2□□□□□ -1.74
TRBV5-4A0A0C4DH59 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRBV5-4A0A0C4DH59 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 AC126755.2-208ENST00000327792 462 ntBASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 AC138969.1-213ENST00000331436 462 ntBASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 SNORA63.3-201ENST00000362682 132 ntBASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 AL161909.1-201ENST00000397390 712 ntBASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 RPS6P14-201ENST00000425165 719 ntBASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 BTF3P10-201ENST00000433415 495 ntBASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 H2AFZP6-201ENST00000444403 394 ntBASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 CLIC4P1-201ENST00000453177 535 ntBASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 RNA5SP246-201ENST00000458909 119 ntBASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 AC012123.2-201ENST00000485809 248 ntBASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 AC107398.1-201ENST00000486904 505 ntBASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 AC092902.1-201ENST00000486999 259 ntBASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 AC091167.1-201ENST00000492017 396 ntBASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 AC093890.1-201ENST00000502554 540 ntBASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 KCTD9P2-201ENST00000512203 1013 ntBASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 HIGD1AP18-201ENST00000520730 278 ntBASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 AC018552.1-201ENST00000562099 811 ntBASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 AP005262.1-201ENST00000582646 997 ntBASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 AL049844.2-201ENST00000604280 628 ntBASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 AC092953.2-201ENST00000608000 699 ntBASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 AC110792.4-201ENST00000609843 298 ntBASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 AP000943.4-201ENST00000622912 357 ntBASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 AC145207.9-201ENST00000623802 325 ntBASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 MIR3653-201ENST00000625572 110 ntBASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 AL133243.3-201ENST00000617415 3004 ntBASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 AL606537.1-201ENST00000607258 2011 ntBASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
TRBV5-4A0A0C4DH59 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
TRBV5-4A0A0C4DH59 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRBV5-4A0A0C4DH59 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.18□□□□□ -1.74
TRBV5-4A0A0C4DH59 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRBV5-4A0A0C4DH59 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.18□□□□□ -1.74
TRBV5-4A0A0C4DH59 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.18□□□□□ -1.74
TRBV5-4A0A0C4DH59 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRBV5-4A0A0C4DH59 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
TRBV5-4A0A0C4DH59 RNU6-666P-201ENST00000363499 107 ntBASIC4.18□□□□□ -1.74
TRBV5-4A0A0C4DH59 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.18□□□□□ -1.74
TRBV5-4A0A0C4DH59 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRBV5-4A0A0C4DH59 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.18□□□□□ -1.74
TRBV5-4A0A0C4DH59 RPL23AP26-201ENST00000412728 464 ntBASIC4.18□□□□□ -1.74
TRBV5-4A0A0C4DH59 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TRBV5-4A0A0C4DH59 CHIAP3-201ENST00000423668 1133 ntBASIC4.18□□□□□ -1.74
TRBV5-4A0A0C4DH59 AC022022.1-201ENST00000430304 178 ntBASIC4.18□□□□□ -1.74
TRBV5-4A0A0C4DH59 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.18□□□□□ -1.74
TRBV5-4A0A0C4DH59 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.18□□□□□ -1.74
TRBV5-4A0A0C4DH59 HLA-N-201ENST00000437516 135 ntBASIC4.18□□□□□ -1.74
TRBV5-4A0A0C4DH59 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.18□□□□□ -1.74
TRBV5-4A0A0C4DH59 AL158053.1-201ENST00000441503 453 ntBASIC4.18□□□□□ -1.74
TRBV5-4A0A0C4DH59 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
TRBV5-4A0A0C4DH59 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms