Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AC026368.1-201ENST00000614934 690 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 U1.34-201ENST00000618578 162 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AC079777.1-201ENST00000623836 1953 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 Y_RNA.796-201ENST00000364268 102 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 RNU1-24P-201ENST00000364285 165 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 Y_RNA.799-201ENST00000364992 102 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 RSL24D1P4-201ENST00000400938 484 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AC093151.1-201ENST00000427711 313 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AC108734.1-201ENST00000439549 399 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AC044913.1-201ENST00000557200 430 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AADACP1-206ENST00000561502 1193 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AC243312.2-201ENST00000623340 601 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AL121839.2-201ENST00000565058 6943 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 SLC24A4-205ENST00000532405 9950 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AC234772.1-201ENST00000377927 937 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 SNORD105B-201ENST00000458770 79 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 DYNLL1P5-201ENST00000467158 270 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AC103843.2-201ENST00000530523 682 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AC015914.2-201ENST00000618167 288 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AC010329.1-201ENST00000593903 8328 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AC090740.1-201ENST00000623193 2262 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 UBE2V1P6-201ENST00000430840 422 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 RPL35AP15-201ENST00000468042 339 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 RPS29P19-201ENST00000479709 171 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AC113430.1-201ENST00000506872 718 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 RNU4-29P-201ENST00000515943 174 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 YPEL5P3-201ENST00000547227 352 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AC124312.4-201ENST00000605533 310 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AL096803.3-201ENST00000609032 532 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 MIR6868-201ENST00000611215 58 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 Y_RNA.303-201ENST00000364998 94 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AC007618.1-201ENST00000366455 732 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 RNU2-27P-201ENST00000516185 142 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AL606834.2-201ENST00000602954 668 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 FRG1EP-201ENST00000634469 770 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AC010478.1-201ENST00000601500 6762 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AC004656.1-201ENST00000568479 4951 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 AL049781.1-201ENST00000623195 3585 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 NAMPTP1-201ENST00000440465 2514 ntBASIC1.63□□□□□ -2.15
MACF1Q9UPN3 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
MACF1Q9UPN3 SPATA2P1-201ENST00000431223 2055 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms