Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 NXPH1-205ENST00000602349 1953 ntBASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 RNA5SP130-201ENST00000364431 114 ntBASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 AL034374.1-201ENST00000406329 351 ntBASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 RPL7P2-201ENST00000427639 268 ntBASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 AC112230.1-201ENST00000604342 547 ntBASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 AC092647.1-201ENST00000420654 287 ntBASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 VTI1BP4-201ENST00000427516 527 ntBASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 RPL21P91-201ENST00000429231 479 ntBASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 AC022022.1-201ENST00000430304 178 ntBASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 AC023512.1-201ENST00000444513 499 ntBASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 NFU1-207ENST00000462320 558 ntTSL 4 BASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 AC037198.2-201ENST00000478845 733 ntBASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 RNA5SP446-201ENST00000515955 82 ntBASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 IMMP1LP1-201ENST00000605170 488 ntBASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 AC005858.4-201ENST00000623191 700 ntBASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SHROOM4Q9ULL8 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SHROOM4Q9ULL8 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
SHROOM4Q9ULL8 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
SHROOM4Q9ULL8 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SHROOM4Q9ULL8 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
SHROOM4Q9ULL8 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
SHROOM4Q9ULL8 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SHROOM4Q9ULL8 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC8.25□□□□□ -1.09
SHROOM4Q9ULL8 AC092162.3-201ENST00000624511 1624 ntBASIC8.25□□□□□ -1.09
SHROOM4Q9ULL8 AL049781.1-201ENST00000623195 3585 ntBASIC8.25□□□□□ -1.09
SHROOM4Q9ULL8 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SHROOM4Q9ULL8 MIR7-3-201ENST00000384898 110 ntBASIC8.25□□□□□ -1.09
SHROOM4Q9ULL8 AC073464.3-201ENST00000422564 712 ntBASIC8.25□□□□□ -1.09
SHROOM4Q9ULL8 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC8.25□□□□□ -1.09
SHROOM4Q9ULL8 CYCSP43-201ENST00000438233 310 ntBASIC8.25□□□□□ -1.09
SHROOM4Q9ULL8 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC8.25□□□□□ -1.09
SHROOM4Q9ULL8 XKRY2-201ENST00000442362 1093 ntBASIC8.25□□□□□ -1.09
SHROOM4Q9ULL8 RPS3AP12-201ENST00000443616 753 ntBASIC8.25□□□□□ -1.09
SHROOM4Q9ULL8 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC8.25□□□□□ -1.09
SHROOM4Q9ULL8 CABYRP1-201ENST00000465493 1045 ntBASIC8.25□□□□□ -1.09
SHROOM4Q9ULL8 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC8.25□□□□□ -1.09
SHROOM4Q9ULL8 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC8.25□□□□□ -1.09
SHROOM4Q9ULL8 AC099522.1-202ENST00000514718 367 ntBASIC8.25□□□□□ -1.09
SHROOM4Q9ULL8 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC8.25□□□□□ -1.09
SHROOM4Q9ULL8 CKS1BP1-201ENST00000555221 240 ntBASIC8.25□□□□□ -1.09
SHROOM4Q9ULL8 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
SHROOM4Q9ULL8 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC8.25□□□□□ -1.09
SHROOM4Q9ULL8 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC8.25□□□□□ -1.09
SHROOM4Q9ULL8 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
SHROOM4Q9ULL8 AC020923.1-201ENST00000624021 917 ntBASIC8.25□□□□□ -1.09
SHROOM4Q9ULL8 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
SHROOM4Q9ULL8 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
SHROOM4Q9ULL8 AC097461.1-201ENST00000568928 2821 ntBASIC8.24□□□□□ -1.09
SHROOM4Q9ULL8 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC8.24□□□□□ -1.09
SHROOM4Q9ULL8 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SHROOM4Q9ULL8 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC8.24□□□□□ -1.09
SHROOM4Q9ULL8 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
SHROOM4Q9ULL8 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
SHROOM4Q9ULL8 RNU6-249P-201ENST00000363016 102 ntBASIC8.24□□□□□ -1.09
SHROOM4Q9ULL8 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC8.24□□□□□ -1.09
SHROOM4Q9ULL8 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SHROOM4Q9ULL8 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SHROOM4Q9ULL8 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SHROOM4Q9ULL8 AC092691.2-201ENST00000461787 803 ntBASIC8.24□□□□□ -1.09
SHROOM4Q9ULL8 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC8.24□□□□□ -1.09
SHROOM4Q9ULL8 RPL23AP37-201ENST00000479658 549 ntBASIC8.24□□□□□ -1.09
SHROOM4Q9ULL8 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC8.24□□□□□ -1.09
SHROOM4Q9ULL8 RNA5SP519-201ENST00000516480 119 ntBASIC8.24□□□□□ -1.09
SHROOM4Q9ULL8 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC8.24□□□□□ -1.09
SHROOM4Q9ULL8 MIR7151-201ENST00000617477 60 ntBASIC8.24□□□□□ -1.09
SHROOM4Q9ULL8 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
SHROOM4Q9ULL8 CR392039.5-201ENST00000623201 510 ntBASIC8.24□□□□□ -1.09
SHROOM4Q9ULL8 AC145207.9-201ENST00000623802 325 ntBASIC8.24□□□□□ -1.09
SHROOM4Q9ULL8 AC020978.9-201ENST00000624380 1141 ntBASIC8.24□□□□□ -1.09
SHROOM4Q9ULL8 AL356094.1-201ENST00000624663 1212 ntBASIC8.24□□□□□ -1.09
SHROOM4Q9ULL8 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SHROOM4Q9ULL8 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SHROOM4Q9ULL8 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC8.24□□□□□ -1.09
SHROOM4Q9ULL8 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC8.23□□□□□ -1.09
SHROOM4Q9ULL8 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC8.23□□□□□ -1.09
SHROOM4Q9ULL8 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SHROOM4Q9ULL8 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SHROOM4Q9ULL8 RNU6-31P-201ENST00000384388 108 ntBASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms