Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 FAM106CP-201ENST00000582212 507 ntBASIC4.82□□□□□ -1.64
SIX4Q9UIU6 RPL26P30-202ENST00000602923 645 ntBASIC4.82□□□□□ -1.64
SIX4Q9UIU6 AC099785.1-201ENST00000605697 437 ntBASIC4.82□□□□□ -1.64
SIX4Q9UIU6 AP002360.3-201ENST00000607673 710 ntBASIC4.82□□□□□ -1.64
SIX4Q9UIU6 AL121873.1-201ENST00000616013 524 ntBASIC4.82□□□□□ -1.64
SIX4Q9UIU6 AC022106.2-201ENST00000620114 757 ntBASIC4.82□□□□□ -1.64
SIX4Q9UIU6 RNU6-368P-201ENST00000620928 107 ntBASIC4.82□□□□□ -1.64
SIX4Q9UIU6 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 RNU6-538P-201ENST00000622329 107 ntBASIC4.82□□□□□ -1.64
SIX4Q9UIU6 AC092159.4-201ENST00000624944 550 ntBASIC4.82□□□□□ -1.64
SIX4Q9UIU6 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SIX4Q9UIU6 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SIX4Q9UIU6 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.81□□□□□ -1.64
SIX4Q9UIU6 OR51H2P-202ENST00000641424 3046 ntBASIC4.81□□□□□ -1.64
SIX4Q9UIU6 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SIX4Q9UIU6 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SIX4Q9UIU6 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SIX4Q9UIU6 ZNF29P-201ENST00000225587 168 ntBASIC4.81□□□□□ -1.64
SIX4Q9UIU6 RNU5B-4P-201ENST00000363508 111 ntBASIC4.81□□□□□ -1.64
SIX4Q9UIU6 SNORD96B-201ENST00000386148 79 ntBASIC4.81□□□□□ -1.64
SIX4Q9UIU6 FCF1P5-201ENST00000406490 482 ntBASIC4.81□□□□□ -1.64
SIX4Q9UIU6 RNU2-17P-201ENST00000410290 190 ntBASIC4.81□□□□□ -1.64
SIX4Q9UIU6 SNRPFP1-201ENST00000414761 252 ntBASIC4.81□□□□□ -1.64
SIX4Q9UIU6 HMGB3P10-201ENST00000434734 572 ntBASIC4.81□□□□□ -1.64
SIX4Q9UIU6 MTCYBP29-201ENST00000436327 1006 ntBASIC4.81□□□□□ -1.64
SIX4Q9UIU6 FABP5P3-201ENST00000437960 408 ntBASIC4.81□□□□□ -1.64
SIX4Q9UIU6 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.81□□□□□ -1.64
SIX4Q9UIU6 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.81□□□□□ -1.64
SIX4Q9UIU6 EXOSC3P1-201ENST00000448649 500 ntBASIC4.81□□□□□ -1.64
SIX4Q9UIU6 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.81□□□□□ -1.64
SIX4Q9UIU6 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SIX4Q9UIU6 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SIX4Q9UIU6 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.81□□□□□ -1.64
SIX4Q9UIU6 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.81□□□□□ -1.64
SIX4Q9UIU6 AC053481.1-201ENST00000467217 306 ntBASIC4.81□□□□□ -1.64
SIX4Q9UIU6 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.81□□□□□ -1.64
SIX4Q9UIU6 AC093890.1-201ENST00000502554 540 ntBASIC4.81□□□□□ -1.64
SIX4Q9UIU6 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.81□□□□□ -1.64
SIX4Q9UIU6 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.81□□□□□ -1.64
SIX4Q9UIU6 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.81□□□□□ -1.64
SIX4Q9UIU6 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.81□□□□□ -1.64
SIX4Q9UIU6 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.81□□□□□ -1.64
SIX4Q9UIU6 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SIX4Q9UIU6 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.81□□□□□ -1.64
SIX4Q9UIU6 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.81□□□□□ -1.64
SIX4Q9UIU6 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.81□□□□□ -1.64
SIX4Q9UIU6 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.81□□□□□ -1.64
SIX4Q9UIU6 AC106734.1-201ENST00000568646 663 ntBASIC4.81□□□□□ -1.64
SIX4Q9UIU6 AL022067.1-201ENST00000602426 454 ntBASIC4.81□□□□□ -1.64
SIX4Q9UIU6 AC103792.1-201ENST00000603591 919 ntBASIC4.81□□□□□ -1.64
SIX4Q9UIU6 AC087683.2-201ENST00000611384 326 ntBASIC4.81□□□□□ -1.64
SIX4Q9UIU6 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.81□□□□□ -1.64
SIX4Q9UIU6 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.81□□□□□ -1.64
SIX4Q9UIU6 AC005086.4-201ENST00000623065 213 ntBASIC4.81□□□□□ -1.64
SIX4Q9UIU6 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.81□□□□□ -1.64
SIX4Q9UIU6 AC006927.2-201ENST00000639256 389 ntBASIC4.81□□□□□ -1.64
SIX4Q9UIU6 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SIX4Q9UIU6 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SIX4Q9UIU6 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.81□□□□□ -1.64
SIX4Q9UIU6 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.81□□□□□ -1.64
SIX4Q9UIU6 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SIX4Q9UIU6 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SIX4Q9UIU6 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.81□□□□□ -1.64
SIX4Q9UIU6 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.81□□□□□ -1.64
SIX4Q9UIU6 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SIX4Q9UIU6 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SIX4Q9UIU6 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.8□□□□□ -1.64
SIX4Q9UIU6 BTBD10P1-201ENST00000549824 1352 ntBASIC4.8□□□□□ -1.64
SIX4Q9UIU6 NXPH1-205ENST00000602349 1953 ntBASIC4.8□□□□□ -1.64
SIX4Q9UIU6 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SIX4Q9UIU6 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SIX4Q9UIU6 AC008033.1-201ENST00000216407 1162 ntBASIC4.8□□□□□ -1.64
SIX4Q9UIU6 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SIX4Q9UIU6 IGKV7-3-201ENST00000357453 298 ntBASIC4.8□□□□□ -1.64
SIX4Q9UIU6 RNA5SP443-201ENST00000363083 132 ntBASIC4.8□□□□□ -1.64
SIX4Q9UIU6 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.8□□□□□ -1.64
SIX4Q9UIU6 RNU1-63P-201ENST00000383902 164 ntBASIC4.8□□□□□ -1.64
SIX4Q9UIU6 ATF1P1-201ENST00000406040 927 ntBASIC4.8□□□□□ -1.64
SIX4Q9UIU6 RN7SKP167-201ENST00000411047 285 ntBASIC4.8□□□□□ -1.64
SIX4Q9UIU6 XKRYP4-201ENST00000414395 483 ntBASIC4.8□□□□□ -1.64
SIX4Q9UIU6 AC009480.2-201ENST00000422916 432 ntBASIC4.8□□□□□ -1.64
SIX4Q9UIU6 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.8□□□□□ -1.64
SIX4Q9UIU6 RPL18P10-201ENST00000425606 538 ntBASIC4.8□□□□□ -1.64
SIX4Q9UIU6 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.8□□□□□ -1.64
SIX4Q9UIU6 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.8□□□□□ -1.64
SIX4Q9UIU6 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SIX4Q9UIU6 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.8□□□□□ -1.64
SIX4Q9UIU6 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.8□□□□□ -1.64
SIX4Q9UIU6 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.8□□□□□ -1.64
SIX4Q9UIU6 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.8□□□□□ -1.64
SIX4Q9UIU6 RPS27P5-201ENST00000444247 244 ntBASIC4.8□□□□□ -1.64
SIX4Q9UIU6 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.8□□□□□ -1.64
SIX4Q9UIU6 AL157827.1-201ENST00000447622 132 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms