Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL20A1Q9P218 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL20A1Q9P218 MTCO1P7-201ENST00000419523 1542 ntBASIC5.47□□□□□ -1.53
COL20A1Q9P218 AC046144.1-201ENST00000478559 1853 ntBASIC5.47□□□□□ -1.53
COL20A1Q9P218 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
COL20A1Q9P218 AL442639.1-201ENST00000625030 1899 ntBASIC5.47□□□□□ -1.53
COL20A1Q9P218 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
COL20A1Q9P218 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.47□□□□□ -1.53
COL20A1Q9P218 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL20A1Q9P218 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL20A1Q9P218 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
COL20A1Q9P218 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.46□□□□□ -1.53
COL20A1Q9P218 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
COL20A1Q9P218 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.46□□□□□ -1.53
COL20A1Q9P218 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.46□□□□□ -1.54
COL20A1Q9P218 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.46□□□□□ -1.54
COL20A1Q9P218 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL20A1Q9P218 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL20A1Q9P218 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
COL20A1Q9P218 AC096656.1-201ENST00000623826 1364 ntBASIC5.46□□□□□ -1.54
COL20A1Q9P218 SNORA70F-201ENST00000384142 135 ntBASIC5.46□□□□□ -1.54
COL20A1Q9P218 SNORA5.1-201ENST00000384275 131 ntBASIC5.46□□□□□ -1.54
COL20A1Q9P218 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
COL20A1Q9P218 RNU1-82P-201ENST00000390851 165 ntBASIC5.46□□□□□ -1.54
COL20A1Q9P218 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL20A1Q9P218 MIR298-201ENST00000401212 88 ntBASIC5.46□□□□□ -1.54
COL20A1Q9P218 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.46□□□□□ -1.54
COL20A1Q9P218 AL356320.2-201ENST00000417263 507 ntBASIC5.46□□□□□ -1.54
COL20A1Q9P218 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.46□□□□□ -1.54
COL20A1Q9P218 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.46□□□□□ -1.54
COL20A1Q9P218 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.46□□□□□ -1.54
COL20A1Q9P218 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.46□□□□□ -1.54
COL20A1Q9P218 NANOGP2-201ENST00000435391 727 ntBASIC5.46□□□□□ -1.54
COL20A1Q9P218 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.46□□□□□ -1.54
COL20A1Q9P218 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.46□□□□□ -1.54
COL20A1Q9P218 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.46□□□□□ -1.54
COL20A1Q9P218 AC245028.2-201ENST00000458673 253 ntBASIC5.46□□□□□ -1.54
COL20A1Q9P218 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COL20A1Q9P218 AC004263.1-201ENST00000479327 332 ntBASIC5.46□□□□□ -1.54
COL20A1Q9P218 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COL20A1Q9P218 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.46□□□□□ -1.54
COL20A1Q9P218 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.46□□□□□ -1.54
COL20A1Q9P218 RNU6-709P-201ENST00000517257 104 ntBASIC5.46□□□□□ -1.54
COL20A1Q9P218 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.46□□□□□ -1.54
COL20A1Q9P218 MTCO2P15-201ENST00000532655 656 ntBASIC5.46□□□□□ -1.54
COL20A1Q9P218 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.46□□□□□ -1.54
COL20A1Q9P218 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.46□□□□□ -1.54
COL20A1Q9P218 PCNAP1-202ENST00000595299 752 ntBASIC5.46□□□□□ -1.54
COL20A1Q9P218 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.46□□□□□ -1.54
COL20A1Q9P218 DUXAP3-201ENST00000603616 594 ntBASIC5.46□□□□□ -1.54
COL20A1Q9P218 AC107952.2-201ENST00000606048 486 ntBASIC5.46□□□□□ -1.54
COL20A1Q9P218 AC007349.4-201ENST00000608114 532 ntBASIC5.46□□□□□ -1.54
COL20A1Q9P218 AC023509.5-201ENST00000617434 807 ntBASIC5.46□□□□□ -1.54
COL20A1Q9P218 AC120349.3-201ENST00000624377 529 ntBASIC5.46□□□□□ -1.54
COL20A1Q9P218 AC079416.3-201ENST00000624479 549 ntBASIC5.46□□□□□ -1.54
COL20A1Q9P218 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL20A1Q9P218 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.46□□□□□ -1.54
COL20A1Q9P218 RNF6P1-201ENST00000444889 1784 ntBASIC5.46□□□□□ -1.54
COL20A1Q9P218 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL20A1Q9P218 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COL20A1Q9P218 AC125336.1-201ENST00000508893 2827 ntBASIC5.46□□□□□ -1.54
COL20A1Q9P218 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL20A1Q9P218 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COL20A1Q9P218 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL20A1Q9P218 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.45□□□□□ -1.54
COL20A1Q9P218 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL20A1Q9P218 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL20A1Q9P218 HSPA8P17-201ENST00000427029 1382 ntBASIC5.45□□□□□ -1.54
COL20A1Q9P218 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL20A1Q9P218 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.45□□□□□ -1.54
COL20A1Q9P218 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL20A1Q9P218 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
COL20A1Q9P218 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
COL20A1Q9P218 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.45□□□□□ -1.54
COL20A1Q9P218 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL20A1Q9P218 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL20A1Q9P218 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
COL20A1Q9P218 AL049545.1-201ENST00000401856 572 ntBASIC5.45□□□□□ -1.54
COL20A1Q9P218 RNU6-77P-201ENST00000410554 91 ntBASIC5.45□□□□□ -1.54
COL20A1Q9P218 AC016397.1-201ENST00000412463 242 ntBASIC5.45□□□□□ -1.54
COL20A1Q9P218 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL20A1Q9P218 AC027644.1-201ENST00000419595 298 ntBASIC5.45□□□□□ -1.54
COL20A1Q9P218 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.45□□□□□ -1.54
COL20A1Q9P218 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.45□□□□□ -1.54
COL20A1Q9P218 RAC1P8-201ENST00000427086 527 ntBASIC5.45□□□□□ -1.54
COL20A1Q9P218 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.45□□□□□ -1.54
COL20A1Q9P218 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.45□□□□□ -1.54
COL20A1Q9P218 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL20A1Q9P218 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.45□□□□□ -1.54
COL20A1Q9P218 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL20A1Q9P218 RHEBP2-201ENST00000450289 600 ntBASIC5.45□□□□□ -1.54
COL20A1Q9P218 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL20A1Q9P218 BX248409.1-201ENST00000455497 255 ntBASIC5.45□□□□□ -1.54
COL20A1Q9P218 RPL7AP52-201ENST00000458096 790 ntBASIC5.45□□□□□ -1.54
COL20A1Q9P218 AC021660.1-201ENST00000465006 554 ntBASIC5.45□□□□□ -1.54
COL20A1Q9P218 AC073522.1-201ENST00000483312 377 ntBASIC5.45□□□□□ -1.54
COL20A1Q9P218 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.45□□□□□ -1.54
COL20A1Q9P218 AC111000.3-201ENST00000508057 576 ntBASIC5.45□□□□□ -1.54
COL20A1Q9P218 AP001636.2-201ENST00000525517 696 ntBASIC5.45□□□□□ -1.54
COL20A1Q9P218 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms