Protein–RNA interactions for Protein: Q9P1A2

PPP4R1L, Putative serine/threonine-protein phosphatase 4 regulatory subunit 1-like, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1LQ9P1A2 AC020633.1-201ENST00000468439 2247 ntBASIC5.35□□□□□ -1.55
PPP4R1LQ9P1A2 BCORP1-203ENST00000513194 5093 ntBASIC5.35□□□□□ -1.55
PPP4R1LQ9P1A2 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.35□□□□□ -1.55
PPP4R1LQ9P1A2 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PPP4R1LQ9P1A2 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 AL590763.1-201ENST00000398297 1545 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 MTCO1P7-201ENST00000419523 1542 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 AC135352.1-201ENST00000506173 1418 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 AC092111.2-201ENST00000611627 1414 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 Y_RNA.372-201ENST00000365599 102 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 MT-TD-201ENST00000387419 68 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 CCNG1P1-201ENST00000406783 885 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 FCF1P10-201ENST00000407590 479 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 RPA2P2-201ENST00000419698 796 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 RPS3P2-201ENST00000421346 701 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 AL354766.1-201ENST00000423396 542 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 BX323845.3-201ENST00000428215 527 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 AL050321.1-201ENST00000432363 400 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 AC073614.1-201ENST00000438690 650 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 MTND5P14-201ENST00000441481 1267 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 AC093166.4-201ENST00000457867 318 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 RN7SL72P-201ENST00000460697 269 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 GAPDHP39-201ENST00000481866 979 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 MTCYBP17-201ENST00000503579 789 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 AC091133.4-201ENST00000511142 308 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 AC024589.1-201ENST00000512207 263 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 CENPUP1-201ENST00000526649 1202 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 NIFKP8-201ENST00000560500 874 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 AC091489.2-201ENST00000566263 604 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 AC019322.1-201ENST00000571869 389 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 MIR4260-201ENST00000583107 67 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 AC005224.3-201ENST00000584683 2140 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 UBE2V2P2-201ENST00000587677 504 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 VN1R79P-201ENST00000593540 513 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 AC024560.3-201ENST00000608482 349 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 AL355974.3-201ENST00000617383 467 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 AC124864.2-201ENST00000624736 186 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 AL161756.3-201ENST00000641216 2071 ntBASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PPP4R1LQ9P1A2 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.56
PPP4R1LQ9P1A2 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
PPP4R1LQ9P1A2 AP004607.3-201ENST00000530354 3915 ntBASIC5.34□□□□□ -1.56
PPP4R1LQ9P1A2 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
PPP4R1LQ9P1A2 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.34□□□□□ -1.56
PPP4R1LQ9P1A2 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
PPP4R1LQ9P1A2 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
PPP4R1LQ9P1A2 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
PPP4R1LQ9P1A2 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PPP4R1LQ9P1A2 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PPP4R1LQ9P1A2 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
PPP4R1LQ9P1A2 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.33□□□□□ -1.56
PPP4R1LQ9P1A2 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PPP4R1LQ9P1A2 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
PPP4R1LQ9P1A2 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PPP4R1LQ9P1A2 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
PPP4R1LQ9P1A2 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms