Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 DDX6P1-205ENST00000441966 1436 ntBASIC4.65□□□□□ -1.66
HPS4Q9NQG7 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.65□□□□□ -1.66
HPS4Q9NQG7 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
HPS4Q9NQG7 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HPS4Q9NQG7 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.65□□□□□ -1.66
HPS4Q9NQG7 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
HPS4Q9NQG7 RNA5SP28-201ENST00000363841 119 ntBASIC4.65□□□□□ -1.67
HPS4Q9NQG7 RNU6-31P-201ENST00000384388 108 ntBASIC4.65□□□□□ -1.67
HPS4Q9NQG7 SNORA70C-201ENST00000384538 135 ntBASIC4.65□□□□□ -1.67
HPS4Q9NQG7 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.65□□□□□ -1.67
HPS4Q9NQG7 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.65□□□□□ -1.67
HPS4Q9NQG7 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC4.65□□□□□ -1.67
HPS4Q9NQG7 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.65□□□□□ -1.67
HPS4Q9NQG7 SEC63P1-201ENST00000425785 1258 ntBASIC4.65□□□□□ -1.67
HPS4Q9NQG7 RWDD4P2-201ENST00000426392 563 ntBASIC4.65□□□□□ -1.67
HPS4Q9NQG7 RPS12P10-201ENST00000427031 377 ntBASIC4.65□□□□□ -1.67
HPS4Q9NQG7 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.65□□□□□ -1.67
HPS4Q9NQG7 NDUFA5P10-201ENST00000432147 357 ntBASIC4.65□□□□□ -1.67
HPS4Q9NQG7 RPS3AP54-201ENST00000435535 734 ntBASIC4.65□□□□□ -1.67
HPS4Q9NQG7 PHBP16-201ENST00000446318 950 ntBASIC4.65□□□□□ -1.67
HPS4Q9NQG7 RPL23AP43-201ENST00000446445 471 ntBASIC4.65□□□□□ -1.67
HPS4Q9NQG7 AL935212.3-201ENST00000450729 284 ntBASIC4.65□□□□□ -1.67
HPS4Q9NQG7 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.65□□□□□ -1.67
HPS4Q9NQG7 RWDD4P1-201ENST00000488019 565 ntBASIC4.65□□□□□ -1.67
HPS4Q9NQG7 HMGB1P3-201ENST00000502802 616 ntBASIC4.65□□□□□ -1.67
HPS4Q9NQG7 CDH12P2-201ENST00000504393 298 ntBASIC4.65□□□□□ -1.67
HPS4Q9NQG7 AC093770.1-201ENST00000511559 571 ntBASIC4.65□□□□□ -1.67
HPS4Q9NQG7 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.65□□□□□ -1.67
HPS4Q9NQG7 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.65□□□□□ -1.67
HPS4Q9NQG7 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.65□□□□□ -1.67
HPS4Q9NQG7 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.65□□□□□ -1.67
HPS4Q9NQG7 AC068714.1-201ENST00000559623 800 ntBASIC4.65□□□□□ -1.67
HPS4Q9NQG7 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.65□□□□□ -1.67
HPS4Q9NQG7 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.65□□□□□ -1.67
HPS4Q9NQG7 AC091979.2-201ENST00000607514 214 ntBASIC4.65□□□□□ -1.67
HPS4Q9NQG7 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.65□□□□□ -1.67
HPS4Q9NQG7 MIR6715B-201ENST00000637172 77 ntBASIC4.65□□□□□ -1.67
HPS4Q9NQG7 LINC01808-202ENST00000641680 1116 ntBASIC4.65□□□□□ -1.67
HPS4Q9NQG7 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
HPS4Q9NQG7 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.65□□□□□ -1.67
HPS4Q9NQG7 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
HPS4Q9NQG7 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.65□□□□□ -1.67
HPS4Q9NQG7 PNPT1P2-201ENST00000456768 2050 ntBASIC4.65□□□□□ -1.67
HPS4Q9NQG7 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HPS4Q9NQG7 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HPS4Q9NQG7 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.64□□□□□ -1.67
HPS4Q9NQG7 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
HPS4Q9NQG7 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HPS4Q9NQG7 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HPS4Q9NQG7 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.64□□□□□ -1.67
HPS4Q9NQG7 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
HPS4Q9NQG7 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
HPS4Q9NQG7 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
HPS4Q9NQG7 AL121657.1-201ENST00000327215 531 ntBASIC4.64□□□□□ -1.67
HPS4Q9NQG7 SNORA57.1-201ENST00000391227 145 ntBASIC4.64□□□□□ -1.67
HPS4Q9NQG7 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HPS4Q9NQG7 RN7SKP263-201ENST00000411194 309 ntBASIC4.64□□□□□ -1.67
HPS4Q9NQG7 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.64□□□□□ -1.67
HPS4Q9NQG7 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.64□□□□□ -1.67
HPS4Q9NQG7 MTCO3P21-201ENST00000430791 643 ntBASIC4.64□□□□□ -1.67
HPS4Q9NQG7 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.64□□□□□ -1.67
HPS4Q9NQG7 AC011998.1-201ENST00000433403 117 ntBASIC4.64□□□□□ -1.67
HPS4Q9NQG7 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.64□□□□□ -1.67
HPS4Q9NQG7 ACTR3P2-201ENST00000439585 1257 ntBASIC4.64□□□□□ -1.67
HPS4Q9NQG7 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.64□□□□□ -1.67
HPS4Q9NQG7 AC053481.1-201ENST00000467217 306 ntBASIC4.64□□□□□ -1.67
HPS4Q9NQG7 DEFB109F-201ENST00000491870 277 ntBASIC4.64□□□□□ -1.67
HPS4Q9NQG7 AC091167.1-201ENST00000492017 396 ntBASIC4.64□□□□□ -1.67
HPS4Q9NQG7 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.64□□□□□ -1.67
HPS4Q9NQG7 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.64□□□□□ -1.67
HPS4Q9NQG7 AC093824.1-201ENST00000508796 343 ntBASIC4.64□□□□□ -1.67
HPS4Q9NQG7 MTCO1P35-201ENST00000515270 228 ntBASIC4.64□□□□□ -1.67
HPS4Q9NQG7 AC134698.5-201ENST00000519444 336 ntBASIC4.64□□□□□ -1.67
HPS4Q9NQG7 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.64□□□□□ -1.67
HPS4Q9NQG7 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.64□□□□□ -1.67
HPS4Q9NQG7 MRPL49P2-201ENST00000521066 465 ntBASIC4.64□□□□□ -1.67
HPS4Q9NQG7 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HPS4Q9NQG7 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.64□□□□□ -1.67
HPS4Q9NQG7 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HPS4Q9NQG7 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.64□□□□□ -1.67
HPS4Q9NQG7 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.64□□□□□ -1.67
HPS4Q9NQG7 AC025884.1-201ENST00000556034 378 ntBASIC4.64□□□□□ -1.67
HPS4Q9NQG7 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.64□□□□□ -1.67
HPS4Q9NQG7 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.64□□□□□ -1.67
HPS4Q9NQG7 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.64□□□□□ -1.67
HPS4Q9NQG7 AL162233.1-201ENST00000620014 944 ntBASIC4.64□□□□□ -1.67
HPS4Q9NQG7 AL023881.1-201ENST00000621088 301 ntBASIC4.64□□□□□ -1.67
HPS4Q9NQG7 AC145207.9-201ENST00000623802 325 ntBASIC4.64□□□□□ -1.67
HPS4Q9NQG7 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.64□□□□□ -1.67
HPS4Q9NQG7 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.64□□□□□ -1.67
HPS4Q9NQG7 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HPS4Q9NQG7 AL118496.1-201ENST00000440201 1812 ntBASIC4.64□□□□□ -1.67
HPS4Q9NQG7 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HPS4Q9NQG7 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
HPS4Q9NQG7 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HPS4Q9NQG7 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HPS4Q9NQG7 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
HPS4Q9NQG7 AC017002.4-201ENST00000604721 1525 ntBASIC4.63□□□□□ -1.67
HPS4Q9NQG7 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
HPS4Q9NQG7 CPHL1P-201ENST00000461341 3407 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms