Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 Mico1.1-201ENST00000611698 204 ntBASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 MIR6730-201ENST00000622213 67 ntBASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 AL359715.5-201ENST00000623431 443 ntBASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 AC010928.1-201ENST00000592477 1447 ntBASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 AL359715.4-201ENST00000606629 1436 ntBASIC4.04□□□□□ -1.76
CCNB1IP1Q9NPC3 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 RNA5SP502-201ENST00000362694 119 ntBASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 RNU6-31P-201ENST00000384388 108 ntBASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 SDHCP2-201ENST00000398565 501 ntBASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 RPS27AP11-201ENST00000402798 447 ntBASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 MIR1911-201ENST00000410783 80 ntBASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 LYPLA1P1-201ENST00000434514 622 ntBASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 MTCYBP12-201ENST00000440559 1134 ntBASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 AC108463.1-201ENST00000450258 347 ntBASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 AL133477.1-201ENST00000457472 514 ntBASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 SCARNA10-201ENST00000459255 330 ntBASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 RPL35AP28-201ENST00000459730 331 ntBASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 RPL23AP12-201ENST00000467573 473 ntBASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 AC010683.1-201ENST00000473673 378 ntBASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 AC006517.1-201ENST00000480485 328 ntBASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 EIF1AXP2-201ENST00000555940 413 ntBASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 AL360157.1-201ENST00000565962 87 ntBASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 AC005034.4-201ENST00000603612 899 ntBASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 AC135803.1-201ENST00000608748 565 ntBASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 AC009452.1-201ENST00000640823 606 ntBASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.03□□□□□ -1.76
CCNB1IP1Q9NPC3 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 RNU6-244P-201ENST00000391028 104 ntBASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 OR1F12-201ENST00000402365 945 ntBASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 HMGB1P32-201ENST00000425971 565 ntBASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 USP9YP9-201ENST00000429406 715 ntBASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 AL049745.1-201ENST00000433953 286 ntBASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 AL162591.2-201ENST00000449634 317 ntBASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 AC011037.1-201ENST00000483964 558 ntBASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 AC105233.1-201ENST00000498840 781 ntBASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 MTND4LP2-201ENST00000502312 285 ntBASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 AC108120.2-201ENST00000512973 294 ntBASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 AC018797.3-201ENST00000513388 1241 ntBASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 AL049844.2-201ENST00000604280 628 ntBASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 AC024940.4-201ENST00000605507 246 ntBASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 AL161616.1-201ENST00000611867 286 ntBASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 AC007342.8-201ENST00000623278 678 ntBASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 AP003072.4-201ENST00000624580 310 ntBASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 LINC01808-202ENST00000641680 1116 ntBASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCNB1IP1Q9NPC3 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms