Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AL021331.1-201ENST00000402817 582 ntBASIC4.73□□□□□ -1.65
BRF2Q9HAW0 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.73□□□□□ -1.65
BRF2Q9HAW0 AC007394.1-201ENST00000421941 531 ntBASIC4.73□□□□□ -1.65
BRF2Q9HAW0 RPL30P3-201ENST00000424262 333 ntBASIC4.73□□□□□ -1.65
BRF2Q9HAW0 AC092648.1-201ENST00000425870 423 ntBASIC4.73□□□□□ -1.65
BRF2Q9HAW0 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.73□□□□□ -1.65
BRF2Q9HAW0 AL035246.1-201ENST00000433554 1255 ntBASIC4.73□□□□□ -1.65
BRF2Q9HAW0 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.73□□□□□ -1.65
BRF2Q9HAW0 TMX2P1-201ENST00000436507 708 ntBASIC4.73□□□□□ -1.65
BRF2Q9HAW0 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.73□□□□□ -1.65
BRF2Q9HAW0 AC004865.1-201ENST00000442276 1003 ntBASIC4.73□□□□□ -1.65
BRF2Q9HAW0 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.73□□□□□ -1.65
BRF2Q9HAW0 MRPL48P1-201ENST00000445390 636 ntBASIC4.73□□□□□ -1.65
BRF2Q9HAW0 RPS27AP15-201ENST00000447672 466 ntBASIC4.73□□□□□ -1.65
BRF2Q9HAW0 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.73□□□□□ -1.65
BRF2Q9HAW0 RPL21P71-201ENST00000465598 459 ntBASIC4.73□□□□□ -1.65
BRF2Q9HAW0 GAPDHP39-201ENST00000481866 979 ntBASIC4.73□□□□□ -1.65
BRF2Q9HAW0 AC126121.1-201ENST00000482313 553 ntBASIC4.73□□□□□ -1.65
BRF2Q9HAW0 AC020890.1-201ENST00000491837 504 ntBASIC4.73□□□□□ -1.65
BRF2Q9HAW0 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.73□□□□□ -1.65
BRF2Q9HAW0 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.73□□□□□ -1.65
BRF2Q9HAW0 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.73□□□□□ -1.65
BRF2Q9HAW0 AC113420.1-201ENST00000507903 571 ntBASIC4.73□□□□□ -1.65
BRF2Q9HAW0 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.73□□□□□ -1.65
BRF2Q9HAW0 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.73□□□□□ -1.65
BRF2Q9HAW0 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.73□□□□□ -1.65
BRF2Q9HAW0 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.73□□□□□ -1.65
BRF2Q9HAW0 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.73□□□□□ -1.65
BRF2Q9HAW0 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.73□□□□□ -1.65
BRF2Q9HAW0 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
BRF2Q9HAW0 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.73□□□□□ -1.65
BRF2Q9HAW0 AC090515.3-201ENST00000560431 315 ntBASIC4.73□□□□□ -1.65
BRF2Q9HAW0 CYCSP40-201ENST00000575927 294 ntBASIC4.73□□□□□ -1.65
BRF2Q9HAW0 AC017100.2-201ENST00000584628 355 ntBASIC4.73□□□□□ -1.65
BRF2Q9HAW0 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.73□□□□□ -1.65
BRF2Q9HAW0 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.73□□□□□ -1.65
BRF2Q9HAW0 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.73□□□□□ -1.65
BRF2Q9HAW0 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.73□□□□□ -1.65
BRF2Q9HAW0 AC024060.1-201ENST00000607052 494 ntBASIC4.73□□□□□ -1.65
BRF2Q9HAW0 AC099676.1-201ENST00000608886 657 ntBASIC4.73□□□□□ -1.65
BRF2Q9HAW0 AC063944.3-201ENST00000609969 533 ntBASIC4.73□□□□□ -1.65
BRF2Q9HAW0 AL035461.2-201ENST00000619201 524 ntBASIC4.73□□□□□ -1.65
BRF2Q9HAW0 AL353662.3-201ENST00000625131 237 ntBASIC4.73□□□□□ -1.65
BRF2Q9HAW0 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.73□□□□□ -1.65
BRF2Q9HAW0 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
BRF2Q9HAW0 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.73□□□□□ -1.65
BRF2Q9HAW0 AL355852.1-201ENST00000454081 1771 ntBASIC4.73□□□□□ -1.65
BRF2Q9HAW0 DBF4P1-201ENST00000412976 1892 ntBASIC4.73□□□□□ -1.65
BRF2Q9HAW0 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 AC009643.2-201ENST00000603543 1448 ntBASIC4.72□□□□□ -1.65
BRF2Q9HAW0 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.72□□□□□ -1.65
BRF2Q9HAW0 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 AC004022.2-201ENST00000413824 193 ntBASIC4.72□□□□□ -1.65
BRF2Q9HAW0 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 CKS1BP6-201ENST00000424932 240 ntBASIC4.72□□□□□ -1.65
BRF2Q9HAW0 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 HMGB3P6-201ENST00000444896 598 ntBASIC4.72□□□□□ -1.65
BRF2Q9HAW0 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 RPL23AP15-201ENST00000450202 459 ntBASIC4.72□□□□□ -1.65
BRF2Q9HAW0 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 PRDX3P4-201ENST00000470828 747 ntBASIC4.72□□□□□ -1.65
BRF2Q9HAW0 AC020898.1-201ENST00000474167 787 ntBASIC4.72□□□□□ -1.65
BRF2Q9HAW0 AC090114.3-201ENST00000479267 829 ntBASIC4.72□□□□□ -1.65
BRF2Q9HAW0 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 PGBD4P4-201ENST00000509673 613 ntBASIC4.72□□□□□ -1.65
BRF2Q9HAW0 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 MTCO3P15-201ENST00000526563 574 ntBASIC4.72□□□□□ -1.65
BRF2Q9HAW0 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 OR8K4P-201ENST00000534608 872 ntBASIC4.72□□□□□ -1.65
BRF2Q9HAW0 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 OR11J2P-201ENST00000555298 907 ntBASIC4.72□□□□□ -1.65
BRF2Q9HAW0 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 MIR1269B-201ENST00000580405 75 ntBASIC4.72□□□□□ -1.65
BRF2Q9HAW0 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 AC069304.3-201ENST00000603938 1084 ntBASIC4.72□□□□□ -1.65
BRF2Q9HAW0 AP000238.1-201ENST00000608759 426 ntBASIC4.72□□□□□ -1.65
BRF2Q9HAW0 AP000255.1-201ENST00000610276 676 ntBASIC4.72□□□□□ -1.65
BRF2Q9HAW0 AC105227.2-201ENST00000615075 605 ntBASIC4.72□□□□□ -1.65
BRF2Q9HAW0 MIR6864-201ENST00000617935 70 ntBASIC4.72□□□□□ -1.65
BRF2Q9HAW0 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.72□□□□□ -1.65
BRF2Q9HAW0 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 159 ms