Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LRRC40Q9H9A6 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.4□□□□□ -1.7
LRRC40Q9H9A6 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
LRRC40Q9H9A6 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
LRRC40Q9H9A6 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 RNA5SP175-201ENST00000364275 119 ntBASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 AC097374.1-203ENST00000400783 485 ntBASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 AC069213.2-201ENST00000420238 366 ntBASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 AL356387.2-201ENST00000422272 243 ntBASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 RWDD4P2-201ENST00000426392 563 ntBASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 RPL23AP1-201ENST00000428990 471 ntBASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 AC011998.1-201ENST00000433403 117 ntBASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 MTCO1P52-201ENST00000433928 531 ntBASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 HLA-N-201ENST00000437516 135 ntBASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 RPL7P33-201ENST00000444159 742 ntBASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 NDUFS5P3-201ENST00000450668 321 ntBASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 RWDD4P1-201ENST00000488019 565 ntBASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 RPL23AP72-201ENST00000492447 435 ntBASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 AL049870.4-201ENST00000555741 486 ntBASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 AC021483.2-201ENST00000567415 758 ntBASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 MIR4458-201ENST00000578872 75 ntBASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 AP001542.1-201ENST00000591314 200 ntBASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 RPL12P25-202ENST00000598100 674 ntBASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 AC025175.1-201ENST00000606482 759 ntBASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 AC004948.1-201ENST00000609858 672 ntBASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 uc_338.13-201ENST00000618243 179 ntBASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 AC015813.6-201ENST00000624409 5808 ntBASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 NOL8P1-201ENST00000508336 3529 ntBASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
LRRC40Q9H9A6 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 AL132640.2-201ENST00000559968 1698 ntBASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 SNORA62.2-201ENST00000364672 152 ntBASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 SNORD66.1-201ENST00000391230 76 ntBASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 AL450992.3-201ENST00000413192 568 ntBASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 RPL30P3-201ENST00000424262 333 ntBASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 RPS24P8-201ENST00000431490 402 ntBASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 TPMTP4-201ENST00000450749 678 ntBASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 FGF7P3-201ENST00000454645 303 ntBASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 HMGB1P3-201ENST00000502802 616 ntBASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 AC111000.3-201ENST00000508057 576 ntBASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 OR51K1P-201ENST00000510214 950 ntBASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 RN7SKP92-201ENST00000517266 244 ntBASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 NF1P5-201ENST00000588287 448 ntBASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 ABI1P1-201ENST00000603375 1120 ntBASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 AC093765.1-201ENST00000603758 881 ntBASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 AC010680.3-201ENST00000604215 520 ntBASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 AL031666.3-201ENST00000609320 1006 ntBASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 MIR7973-1-201ENST00000614683 76 ntBASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 AC007546.1-201ENST00000619452 559 ntBASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 MIR6730-201ENST00000622213 67 ntBASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 CR392039.4-201ENST00000624968 501 ntBASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 MTND4P26-201ENST00000415971 1359 ntBASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
LRRC40Q9H9A6 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms