Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 RNA5SP34-201ENST00000516887 130 ntBASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 HMGB1P23-201ENST00000518743 568 ntBASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 OR4K7P-201ENST00000580232 945 ntBASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 AC073544.2-201ENST00000601155 540 ntBASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 DEFB131E-202ENST00000602581 683 ntBASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 AL589674.2-201ENST00000604304 337 ntBASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 AC244107.2-201ENST00000611773 76 ntBASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 AC037198.3-201ENST00000616754 526 ntBASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 AK6-205ENST00000618980 483 ntTSL 2 BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 SRRM1P3-201ENST00000426911 2678 ntBASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 AC100778.3-201ENST00000580060 1750 ntBASIC5.04□□□□□ -1.6
AMBRA1Q9C0C7 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 Z99496.1-201ENST00000469424 1477 ntBASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 SNORA58B-201ENST00000364259 136 ntBASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 RNU4-75P-201ENST00000364621 146 ntBASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 SNORA70-201ENST00000384436 135 ntBASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 MIR137-201ENST00000385223 102 ntBASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 MT-TH-201ENST00000387441 69 ntBASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 RN7SKP273-201ENST00000411392 314 ntBASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 AL161449.1-201ENST00000414531 1199 ntBASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 AC012519.1-201ENST00000424588 610 ntBASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 NIPA2P1-201ENST00000426223 976 ntBASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 OR52J1P-201ENST00000450596 932 ntBASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 RPL7P1-201ENST00000468161 747 ntBASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 RPL7P9-201ENST00000468715 747 ntBASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 AC096741.1-201ENST00000472250 846 ntBASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 NCOR1P1-202ENST00000486162 291 ntBASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 AC010424.1-201ENST00000506336 297 ntBASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 AC109481.1-201ENST00000509173 282 ntBASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 HSPE1P23-201ENST00000509838 286 ntBASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 AC010625.1-201ENST00000511296 403 ntBASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 OR8A2P-201ENST00000528631 952 ntBASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 AC007954.1-201ENST00000554198 494 ntBASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 AC022884.3-201ENST00000579571 248 ntBASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 WISP1-OT1-201ENST00000602893 642 ntBASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 AP003973.1-201ENST00000604639 691 ntBASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 AC023509.5-201ENST00000617434 807 ntBASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
AMBRA1Q9C0C7 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms