Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 SNORA75-201ENST00000384158 137 ntBASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 SNORA51.9-201ENST00000384295 124 ntBASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 VN1R8P-201ENST00000407739 893 ntBASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 MYL6P5-201ENST00000412707 459 ntBASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AC007899.1-201ENST00000412776 775 ntBASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AL139128.1-201ENST00000413921 941 ntBASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 SLC44A3-AS1-205ENST00000424505 612 ntBASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 MTCO3P30-201ENST00000426425 670 ntBASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AC112492.2-201ENST00000432774 1030 ntBASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AL391987.1-201ENST00000441025 200 ntBASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AL592447.1-201ENST00000447592 540 ntBASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 MTND1P27-201ENST00000451117 902 ntBASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 RPS15AP17-201ENST00000470598 390 ntBASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 LSM3P4-201ENST00000502948 309 ntBASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 OR8G3P-201ENST00000533406 921 ntBASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AGGF1P8-201ENST00000562979 1000 ntBASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AL163952.1-202ENST00000569625 600 ntBASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 MIR4637-201ENST00000582405 84 ntBASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AC008521.2-201ENST00000591021 259 ntBASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AC104785.1-201ENST00000603220 588 ntBASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AC005191.1-201ENST00000603950 358 ntBASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AL136363.2-201ENST00000604173 851 ntBASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AC005084.1-201ENST00000605160 304 ntBASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 BX323046.1-201ENST00000610145 535 ntBASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AL359535.1-201ENST00000612100 1087 ntBASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AC078899.5-201ENST00000612475 178 ntBASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AC024884.1-201ENST00000620583 399 ntBASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AC005618.4-201ENST00000625053 554 ntBASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM55Q9BYV6 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM55Q9BYV6 MTND4P4-201ENST00000439033 1366 ntBASIC5.94□□□□□ -1.46
TRIM55Q9BYV6 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
TRIM55Q9BYV6 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM55Q9BYV6 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM55Q9BYV6 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM55Q9BYV6 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM55Q9BYV6 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM55Q9BYV6 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
TRIM55Q9BYV6 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
TRIM55Q9BYV6 AC103591.2-201ENST00000265259 766 ntBASIC5.94□□□□□ -1.46
TRIM55Q9BYV6 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
TRIM55Q9BYV6 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
TRIM55Q9BYV6 AL121972.1-201ENST00000402023 252 ntBASIC5.94□□□□□ -1.46
TRIM55Q9BYV6 RN7SKP121-201ENST00000410842 305 ntBASIC5.94□□□□□ -1.46
TRIM55Q9BYV6 AC211486.3-201ENST00000412694 621 ntBASIC5.94□□□□□ -1.46
TRIM55Q9BYV6 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM55Q9BYV6 HMGB1P11-201ENST00000413899 637 ntBASIC5.94□□□□□ -1.46
TRIM55Q9BYV6 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM55Q9BYV6 AL389915.1-201ENST00000422463 466 ntBASIC5.94□□□□□ -1.46
TRIM55Q9BYV6 RPS7P14-201ENST00000426405 583 ntBASIC5.94□□□□□ -1.46
TRIM55Q9BYV6 RPS27AP6-201ENST00000427962 448 ntBASIC5.94□□□□□ -1.46
TRIM55Q9BYV6 USP9YP14-201ENST00000430663 563 ntBASIC5.94□□□□□ -1.46
TRIM55Q9BYV6 MTND1P28-201ENST00000435623 950 ntBASIC5.94□□□□□ -1.46
TRIM55Q9BYV6 TUBB4BP6-201ENST00000437576 479 ntBASIC5.94□□□□□ -1.46
TRIM55Q9BYV6 PPIAP10-201ENST00000438675 458 ntBASIC5.94□□□□□ -1.46
TRIM55Q9BYV6 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM55Q9BYV6 RPL23AP16-201ENST00000441715 421 ntBASIC5.94□□□□□ -1.46
TRIM55Q9BYV6 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms