Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 GAPDHP58-201ENST00000438477 1006 ntBASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 AP000281.1-201ENST00000444036 316 ntBASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 RPL7P59-201ENST00000447700 943 ntBASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 FAR2P1-206ENST00000449736 709 ntBASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 AL133445.1-201ENST00000467051 452 ntBASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 RPS3AP43-201ENST00000479743 781 ntBASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 AC069304.1-201ENST00000491593 704 ntBASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 AC021146.8-201ENST00000507455 733 ntBASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 AC008494.2-201ENST00000514544 370 ntBASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 AP001189.2-201ENST00000527320 189 ntBASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 OR4K7P-201ENST00000580232 945 ntBASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 AC015726.1-201ENST00000602353 681 ntBASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 PSMA6P4-201ENST00000603247 718 ntBASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 AL392048.1-201ENST00000613946 534 ntBASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 AL359757.1-201ENST00000623176 255 ntBASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 AP003072.4-201ENST00000624580 310 ntBASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 AC027228.2-201ENST00000567141 2154 ntBASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 AL603750.1-201ENST00000624216 1717 ntBASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM54Q9BYV2 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 AC023421.1-201ENST00000590535 1785 ntBASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 CASC19-204ENST00000641001 2055 ntBASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 AL353743.4-201ENST00000422653 1547 ntBASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 HSPA8P14-201ENST00000552265 1805 ntBASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 AC005294.1-201ENST00000355509 281 ntBASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 RNA5SP234-201ENST00000363916 119 ntBASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 RN7SKP269-201ENST00000365545 319 ntBASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 OR8V1P-201ENST00000395193 873 ntBASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 AC019050.1-201ENST00000418508 492 ntBASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 AL593851.1-201ENST00000426171 157 ntBASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 MTND4P32-201ENST00000437189 1237 ntBASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 AC144530.1-201ENST00000452862 555 ntBASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 AC245028.2-201ENST00000458673 253 ntBASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 AC058823.1-201ENST00000485315 474 ntBASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 RPL7P41-201ENST00000485823 957 ntBASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 AL136038.1-201ENST00000497246 351 ntBASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 RNU6-347P-201ENST00000516658 105 ntBASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 AC090819.1-201ENST00000523800 1111 ntBASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 AC006349.1-201ENST00000555526 235 ntBASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 SUGT1P3-202ENST00000604259 383 ntBASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 AL451064.1-201ENST00000607718 471 ntBASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 AC079248.2-201ENST00000623779 326 ntBASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM54Q9BYV2 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 AL034549.2-201ENST00000618285 3373 ntBASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 SOCS5P3-201ENST00000425115 1576 ntBASIC5.18□□□□□ -1.58
TRIM54Q9BYV2 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms