Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 RNU6-156P-201ENST00000621869 107 ntBASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 AL139351.1-201ENST00000622092 320 ntBASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 AL161637.1-201ENST00000622380 412 ntBASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 AL139220.2-209ENST00000626342 826 ntTSL 5 BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 KRTAP9-1-202ENST00000634235 351 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 AL133216.2-202ENST00000634512 349 ntBASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 AC245100.4-207ENST00000640776 1082 ntBASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 ALB-209ENST00000503124 1741 ntTSL 5 BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 LRRC37A12P-201ENST00000454917 1801 ntBASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 AP004289.2-201ENST00000444413 1457 ntBASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 AC020633.1-201ENST00000468439 2247 ntBASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LCE3DQ9BYE3 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 AC023245.2-201ENST00000530760 2978 ntBASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 FAM91A3P-201ENST00000456826 2544 ntBASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 EEF1A1P16-201ENST00000325349 1414 ntBASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 DHX40P1-201ENST00000588725 1412 ntBASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 IQCB2P-201ENST00000401788 1633 ntBASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 OSBPL9P4-201ENST00000371707 1800 ntBASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 MTND5P10-201ENST00000603719 1809 ntBASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 RPL12P13-201ENST00000310055 497 ntBASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 OR2M1P-201ENST00000318104 951 ntBASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms