Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 SNORA64.1-201ENST00000362600 132 ntBASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 RNU1-134P-201ENST00000362935 165 ntBASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 RN7SKP213-201ENST00000410746 298 ntBASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 RPL34P19-201ENST00000415903 342 ntBASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 COX6CP17-201ENST00000421389 185 ntBASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 RPL31P12-201ENST00000422587 358 ntBASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 AL356276.2-201ENST00000435919 558 ntBASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 PRDX1P1-201ENST00000449329 596 ntBASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 PCNPP5-201ENST00000452246 481 ntBASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 AC091180.1-201ENST00000462104 372 ntBASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 RN7SL385P-201ENST00000468873 276 ntBASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 AC128713.1-201ENST00000471495 306 ntBASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 AL355032.1-201ENST00000472981 438 ntBASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 AC015911.1-201ENST00000495111 156 ntBASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 AC138866.2-201ENST00000508650 584 ntBASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 OR4T1P-201ENST00000554933 911 ntBASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 AP001180.3-201ENST00000582221 145 ntBASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 AC008115.3-201ENST00000614874 549 ntBASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 AL161756.3-201ENST00000641216 2071 ntBASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 LY75-CD302-201ENST00000504764 5650 ntAPPRIS P4 TSL 2 BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 APP-209ENST00000440126 2846 ntTSL 2 BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 MYO6-207ENST00000615563 4026 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 AL158206.1-201ENST00000563205 1965 ntBASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 MAPK10-287ENST00000641217 3037 ntBASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL25A1Q9BXS0 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 Z99129.4-201ENST00000624649 2435 ntBASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 SAMMSON-210ENST00000641260 1308 ntBASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 AC090771.1-201ENST00000585803 1618 ntBASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 Y_RNA.100-201ENST00000363141 102 ntBASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 RNU6-1066P-201ENST00000363573 105 ntBASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 RN7SKP124-201ENST00000364730 341 ntBASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 SNORA70.3-201ENST00000365075 132 ntBASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 MIR223-201ENST00000385204 110 ntBASIC6.59□□□□□ -1.35
COL25A1Q9BXS0 AC005042.1-201ENST00000393397 800 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms