Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.31□□□□□ -1.56
SMOQ99835 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.31□□□□□ -1.56
SMOQ99835 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.31□□□□□ -1.56
SMOQ99835 AL109741.2-201ENST00000455561 343 ntBASIC5.31□□□□□ -1.56
SMOQ99835 AC091180.1-201ENST00000462104 372 ntBASIC5.31□□□□□ -1.56
SMOQ99835 AC092754.2-201ENST00000463506 460 ntBASIC5.31□□□□□ -1.56
SMOQ99835 AC073522.1-201ENST00000483312 377 ntBASIC5.31□□□□□ -1.56
SMOQ99835 LINC00888-204ENST00000487386 421 ntBASIC5.31□□□□□ -1.56
SMOQ99835 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC5.31□□□□□ -1.56
SMOQ99835 NIFKP7-201ENST00000503365 834 ntBASIC5.31□□□□□ -1.56
SMOQ99835 AC111193.1-201ENST00000504097 155 ntBASIC5.31□□□□□ -1.56
SMOQ99835 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC5.31□□□□□ -1.56
SMOQ99835 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.31□□□□□ -1.56
SMOQ99835 RNU6-416P-201ENST00000516265 103 ntBASIC5.31□□□□□ -1.56
SMOQ99835 AC012339.2-201ENST00000523996 453 ntBASIC5.31□□□□□ -1.56
SMOQ99835 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC5.31□□□□□ -1.56
SMOQ99835 AP000676.2-201ENST00000529711 301 ntBASIC5.31□□□□□ -1.56
SMOQ99835 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.31□□□□□ -1.56
SMOQ99835 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.31□□□□□ -1.56
SMOQ99835 HIGD1AP17-201ENST00000554576 276 ntBASIC5.31□□□□□ -1.56
SMOQ99835 AC040958.1-201ENST00000561102 201 ntBASIC5.31□□□□□ -1.56
SMOQ99835 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.31□□□□□ -1.56
SMOQ99835 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.31□□□□□ -1.56
SMOQ99835 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC5.31□□□□□ -1.56
SMOQ99835 MIR4666A-201ENST00000580160 79 ntBASIC5.31□□□□□ -1.56
SMOQ99835 MIR4436B2-201ENST00000581415 91 ntBASIC5.31□□□□□ -1.56
SMOQ99835 AC011840.5-201ENST00000582125 771 ntBASIC5.31□□□□□ -1.56
SMOQ99835 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.31□□□□□ -1.56
SMOQ99835 MIR4436B1-201ENST00000583272 91 ntBASIC5.31□□□□□ -1.56
SMOQ99835 AL163642.2-201ENST00000604722 1019 ntBASIC5.31□□□□□ -1.56
SMOQ99835 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.31□□□□□ -1.56
SMOQ99835 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.31□□□□□ -1.56
SMOQ99835 AC008121.2-201ENST00000614647 523 ntBASIC5.31□□□□□ -1.56
SMOQ99835 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC5.31□□□□□ -1.56
SMOQ99835 AC022509.4-201ENST00000621404 572 ntBASIC5.31□□□□□ -1.56
SMOQ99835 AC073530.2-201ENST00000623987 261 ntBASIC5.31□□□□□ -1.56
SMOQ99835 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
SMOQ99835 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SMOQ99835 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SMOQ99835 AC010266.2-201ENST00000564741 3255 ntBASIC5.3□□□□□ -1.56
SMOQ99835 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SMOQ99835 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SMOQ99835 AC093311.1-201ENST00000506586 2021 ntBASIC5.3□□□□□ -1.56
SMOQ99835 AL138820.1-201ENST00000617901 5305 ntBASIC5.3□□□□□ -1.56
SMOQ99835 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SMOQ99835 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SMOQ99835 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SMOQ99835 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.3□□□□□ -1.56
SMOQ99835 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SMOQ99835 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SMOQ99835 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SMOQ99835 AL590084.2-201ENST00000401481 382 ntBASIC5.3□□□□□ -1.56
SMOQ99835 AL136131.1-201ENST00000406079 803 ntBASIC5.3□□□□□ -1.56
SMOQ99835 RN7SKP16-201ENST00000410180 299 ntBASIC5.3□□□□□ -1.56
SMOQ99835 CHEK2P3-201ENST00000416118 248 ntBASIC5.3□□□□□ -1.56
SMOQ99835 TIMM9P2-201ENST00000419324 266 ntBASIC5.3□□□□□ -1.56
SMOQ99835 AC098592.1-201ENST00000419352 333 ntBASIC5.3□□□□□ -1.56
SMOQ99835 GTF2IP23-201ENST00000423746 351 ntBASIC5.3□□□□□ -1.56
SMOQ99835 CNOT7P1-201ENST00000429006 852 ntBASIC5.3□□□□□ -1.56
SMOQ99835 USP9YP28-201ENST00000435142 589 ntBASIC5.3□□□□□ -1.56
SMOQ99835 MTND3P1-201ENST00000441336 220 ntBASIC5.3□□□□□ -1.56
SMOQ99835 ATP5C1P1-201ENST00000441945 895 ntBASIC5.3□□□□□ -1.56
SMOQ99835 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.3□□□□□ -1.56
SMOQ99835 RPL21P134-201ENST00000453468 483 ntBASIC5.3□□□□□ -1.56
SMOQ99835 HMGB1P4-201ENST00000455362 567 ntBASIC5.3□□□□□ -1.56
SMOQ99835 RN7SL441P-201ENST00000492388 296 ntBASIC5.3□□□□□ -1.56
SMOQ99835 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SMOQ99835 AC140172.1-201ENST00000502928 141 ntBASIC5.3□□□□□ -1.56
SMOQ99835 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.3□□□□□ -1.56
SMOQ99835 LAMTOR3P2-201ENST00000504479 232 ntBASIC5.3□□□□□ -1.56
SMOQ99835 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SMOQ99835 AC116353.3-201ENST00000511215 249 ntBASIC5.3□□□□□ -1.56
SMOQ99835 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.3□□□□□ -1.56
SMOQ99835 IGJP1-201ENST00000522682 475 ntBASIC5.3□□□□□ -1.56
SMOQ99835 AC100784.1-201ENST00000522790 310 ntBASIC5.3□□□□□ -1.56
SMOQ99835 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.3□□□□□ -1.56
SMOQ99835 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.3□□□□□ -1.56
SMOQ99835 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SMOQ99835 AP000619.3-201ENST00000535634 1127 ntBASIC5.3□□□□□ -1.56
SMOQ99835 AC008033.2-201ENST00000542626 177 ntBASIC5.3□□□□□ -1.56
SMOQ99835 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.3□□□□□ -1.56
SMOQ99835 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.3□□□□□ -1.56
SMOQ99835 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.3□□□□□ -1.56
SMOQ99835 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC5.3□□□□□ -1.56
SMOQ99835 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.3□□□□□ -1.56
SMOQ99835 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.3□□□□□ -1.56
SMOQ99835 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.3□□□□□ -1.56
SMOQ99835 AC011453.2-201ENST00000603737 729 ntBASIC5.3□□□□□ -1.56
SMOQ99835 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.3□□□□□ -1.56
SMOQ99835 AL359757.1-201ENST00000623176 255 ntBASIC5.3□□□□□ -1.56
SMOQ99835 MIR4278-201ENST00000636094 69 ntBASIC5.3□□□□□ -1.56
SMOQ99835 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC5.3□□□□□ -1.56
SMOQ99835 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.3□□□□□ -1.56
SMOQ99835 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.3□□□□□ -1.56
SMOQ99835 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SMOQ99835 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
SMOQ99835 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SMOQ99835 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.3□□□□□ -1.56
SMOQ99835 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SMOQ99835 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms