Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 AGGF1P3-201ENST00000493675 1213 ntBASIC3.13□□□□□ -1.91
MUC4Q99102 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
MUC4Q99102 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.13□□□□□ -1.91
MUC4Q99102 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
MUC4Q99102 PARP4P3-201ENST00000510265 317 ntBASIC3.13□□□□□ -1.91
MUC4Q99102 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.13□□□□□ -1.91
MUC4Q99102 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC3.13□□□□□ -1.91
MUC4Q99102 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.13□□□□□ -1.91
MUC4Q99102 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.13□□□□□ -1.91
MUC4Q99102 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.13□□□□□ -1.91
MUC4Q99102 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.13□□□□□ -1.91
MUC4Q99102 AP005119.2-201ENST00000579735 1105 ntBASIC3.13□□□□□ -1.91
MUC4Q99102 AC012603.1-201ENST00000606424 528 ntBASIC3.13□□□□□ -1.91
MUC4Q99102 AC096577.2-201ENST00000611455 153 ntBASIC3.13□□□□□ -1.91
MUC4Q99102 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC3.13□□□□□ -1.91
MUC4Q99102 AL669942.2-201ENST00000620352 697 ntBASIC3.13□□□□□ -1.91
MUC4Q99102 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
MUC4Q99102 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.13□□□□□ -1.91
MUC4Q99102 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
MUC4Q99102 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.13□□□□□ -1.91
MUC4Q99102 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
MUC4Q99102 VPS35P1-201ENST00000563400 1518 ntBASIC3.13□□□□□ -1.91
MUC4Q99102 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
MUC4Q99102 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
MUC4Q99102 AC073136.2-201ENST00000417282 849 ntBASIC3.12□□□□□ -1.91
MUC4Q99102 YWHAEP5-201ENST00000431545 765 ntBASIC3.12□□□□□ -1.91
MUC4Q99102 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.12□□□□□ -1.91
MUC4Q99102 PTMAP3-201ENST00000447474 330 ntBASIC3.12□□□□□ -1.91
MUC4Q99102 AL162591.2-201ENST00000449634 317 ntBASIC3.12□□□□□ -1.91
MUC4Q99102 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.12□□□□□ -1.91
MUC4Q99102 RPL5P16-201ENST00000471467 790 ntBASIC3.12□□□□□ -1.91
MUC4Q99102 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.12□□□□□ -1.91
MUC4Q99102 ATP1B1P1-201ENST00000509767 915 ntBASIC3.12□□□□□ -1.91
MUC4Q99102 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.12□□□□□ -1.91
MUC4Q99102 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.12□□□□□ -1.91
MUC4Q99102 AC027176.2-201ENST00000559166 746 ntBASIC3.12□□□□□ -1.91
MUC4Q99102 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.12□□□□□ -1.91
MUC4Q99102 AC090312.1-201ENST00000580637 348 ntBASIC3.12□□□□□ -1.91
MUC4Q99102 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.12□□□□□ -1.91
MUC4Q99102 AC091953.5-201ENST00000622919 233 ntBASIC3.12□□□□□ -1.91
MUC4Q99102 AP002967.1-201ENST00000624203 539 ntBASIC3.12□□□□□ -1.91
MUC4Q99102 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
MUC4Q99102 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.12□□□□□ -1.91
MUC4Q99102 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.12□□□□□ -1.91
MUC4Q99102 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
MUC4Q99102 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.12□□□□□ -1.91
MUC4Q99102 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC3.12□□□□□ -1.91
MUC4Q99102 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
MUC4Q99102 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
MUC4Q99102 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
MUC4Q99102 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
MUC4Q99102 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
MUC4Q99102 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.12□□□□□ -1.91
MUC4Q99102 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
MUC4Q99102 RPEP3-201ENST00000425462 676 ntBASIC3.12□□□□□ -1.91
MUC4Q99102 AL157831.1-201ENST00000426134 473 ntBASIC3.12□□□□□ -1.91
MUC4Q99102 HMGB3P5-201ENST00000428894 612 ntBASIC3.12□□□□□ -1.91
MUC4Q99102 TBCAP1-201ENST00000436520 327 ntBASIC3.12□□□□□ -1.91
MUC4Q99102 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.12□□□□□ -1.91
MUC4Q99102 RPL36AP13-201ENST00000457490 317 ntBASIC3.12□□□□□ -1.91
MUC4Q99102 RN7SL98P-201ENST00000462271 300 ntBASIC3.12□□□□□ -1.91
MUC4Q99102 AC025445.1-201ENST00000502728 300 ntBASIC3.12□□□□□ -1.91
MUC4Q99102 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.12□□□□□ -1.91
MUC4Q99102 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.12□□□□□ -1.91
MUC4Q99102 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.12□□□□□ -1.91
MUC4Q99102 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3.12□□□□□ -1.91
MUC4Q99102 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.12□□□□□ -1.91
MUC4Q99102 CCNG2P1-201ENST00000549521 1000 ntBASIC3.12□□□□□ -1.91
MUC4Q99102 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.12□□□□□ -1.91
MUC4Q99102 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
MUC4Q99102 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
MUC4Q99102 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.12□□□□□ -1.91
MUC4Q99102 KPNA2P3-201ENST00000584190 848 ntBASIC3.12□□□□□ -1.91
MUC4Q99102 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.12□□□□□ -1.91
MUC4Q99102 AC087468.1-201ENST00000604365 630 ntBASIC3.12□□□□□ -1.91
MUC4Q99102 AC020634.1-201ENST00000608701 549 ntBASIC3.12□□□□□ -1.91
MUC4Q99102 AL133243.1-201ENST00000614487 366 ntBASIC3.12□□□□□ -1.91
MUC4Q99102 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.12□□□□□ -1.91
MUC4Q99102 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
MUC4Q99102 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.12□□□□□ -1.91
MUC4Q99102 AL592182.3-201ENST00000642132 3304 ntBASIC3.12□□□□□ -1.91
MUC4Q99102 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
MUC4Q99102 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
MUC4Q99102 CR382285.2-201ENST00000624662 1495 ntBASIC3.12□□□□□ -1.91
MUC4Q99102 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.11□□□□□ -1.91
MUC4Q99102 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC3.11□□□□□ -1.91
MUC4Q99102 AL022722.2-201ENST00000402519 180 ntBASIC3.11□□□□□ -1.91
MUC4Q99102 AL160275.2-201ENST00000412010 394 ntBASIC3.11□□□□□ -1.91
MUC4Q99102 MTCO1P51-201ENST00000427672 1060 ntBASIC3.11□□□□□ -1.91
MUC4Q99102 GOT2P5-201ENST00000433995 546 ntBASIC3.11□□□□□ -1.91
MUC4Q99102 SNRPFP2-201ENST00000440710 251 ntBASIC3.11□□□□□ -1.91
MUC4Q99102 DHFRP3-201ENST00000455595 559 ntBASIC3.11□□□□□ -1.91
MUC4Q99102 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.11□□□□□ -1.91
MUC4Q99102 RPL7P49-201ENST00000471402 708 ntBASIC3.11□□□□□ -1.91
MUC4Q99102 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
MUC4Q99102 AP000827.1-201ENST00000527814 258 ntBASIC3.11□□□□□ -1.91
MUC4Q99102 AC022882.1-201ENST00000532142 501 ntBASIC3.11□□□□□ -1.91
MUC4Q99102 TRAV8-5-201ENST00000537369 341 ntBASIC3.11□□□□□ -1.91
MUC4Q99102 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.11□□□□□ -1.91
MUC4Q99102 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms