Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
SNX18Q96RF0 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.9□□□□□ -1.62
SNX18Q96RF0 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SNX18Q96RF0 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.62
SNX18Q96RF0 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SNX18Q96RF0 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SNX18Q96RF0 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
SNX18Q96RF0 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SNX18Q96RF0 IL6STP1-201ENST00000346911 1020 ntBASIC4.9□□□□□ -1.63
SNX18Q96RF0 Y_RNA.194-201ENST00000363985 102 ntBASIC4.9□□□□□ -1.63
SNX18Q96RF0 RNA5SP394-201ENST00000364216 119 ntBASIC4.9□□□□□ -1.63
SNX18Q96RF0 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SNX18Q96RF0 OR3A2-201ENST00000408891 1076 ntBASIC4.9□□□□□ -1.63
SNX18Q96RF0 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.9□□□□□ -1.63
SNX18Q96RF0 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.9□□□□□ -1.63
SNX18Q96RF0 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.9□□□□□ -1.63
SNX18Q96RF0 AC104333.2-201ENST00000422630 192 ntBASIC4.9□□□□□ -1.63
SNX18Q96RF0 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.9□□□□□ -1.63
SNX18Q96RF0 AC005297.1-201ENST00000444765 862 ntBASIC4.9□□□□□ -1.63
SNX18Q96RF0 AL450996.1-201ENST00000445574 1202 ntBASIC4.9□□□□□ -1.63
SNX18Q96RF0 MTCO2P18-201ENST00000457151 658 ntBASIC4.9□□□□□ -1.63
SNX18Q96RF0 AC011225.1-201ENST00000457751 369 ntBASIC4.9□□□□□ -1.63
SNX18Q96RF0 AL035404.1-201ENST00000497982 568 ntBASIC4.9□□□□□ -1.63
SNX18Q96RF0 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.9□□□□□ -1.63
SNX18Q96RF0 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.9□□□□□ -1.63
SNX18Q96RF0 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.9□□□□□ -1.63
SNX18Q96RF0 AC108471.1-201ENST00000513977 287 ntBASIC4.9□□□□□ -1.63
SNX18Q96RF0 ATP5LP3-201ENST00000514223 304 ntBASIC4.9□□□□□ -1.63
SNX18Q96RF0 SCARNA20.4-201ENST00000516969 131 ntBASIC4.9□□□□□ -1.63
SNX18Q96RF0 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.9□□□□□ -1.63
SNX18Q96RF0 CDC42P3-201ENST00000518493 633 ntBASIC4.9□□□□□ -1.63
SNX18Q96RF0 NRBF2P4-201ENST00000520874 850 ntBASIC4.9□□□□□ -1.63
SNX18Q96RF0 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SNX18Q96RF0 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.9□□□□□ -1.63
SNX18Q96RF0 AP001317.1-201ENST00000531194 960 ntBASIC4.9□□□□□ -1.63
SNX18Q96RF0 AC027369.5-201ENST00000533838 755 ntBASIC4.9□□□□□ -1.63
SNX18Q96RF0 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.9□□□□□ -1.63
SNX18Q96RF0 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.9□□□□□ -1.63
SNX18Q96RF0 AC007115.1-201ENST00000546853 234 ntBASIC4.9□□□□□ -1.63
SNX18Q96RF0 AC006349.1-201ENST00000555526 235 ntBASIC4.9□□□□□ -1.63
SNX18Q96RF0 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.9□□□□□ -1.63
SNX18Q96RF0 AC116553.2-201ENST00000564203 463 ntBASIC4.9□□□□□ -1.63
SNX18Q96RF0 AC012213.3-201ENST00000577199 777 ntBASIC4.9□□□□□ -1.63
SNX18Q96RF0 MIR4489-201ENST00000578869 62 ntBASIC4.9□□□□□ -1.63
SNX18Q96RF0 MIR4505-201ENST00000582238 73 ntBASIC4.9□□□□□ -1.63
SNX18Q96RF0 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.9□□□□□ -1.63
SNX18Q96RF0 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.9□□□□□ -1.63
SNX18Q96RF0 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.9□□□□□ -1.63
SNX18Q96RF0 BNIP3P26-201ENST00000600827 554 ntBASIC4.9□□□□□ -1.63
SNX18Q96RF0 AL589674.2-201ENST00000604304 337 ntBASIC4.9□□□□□ -1.63
SNX18Q96RF0 AC104695.2-201ENST00000605056 775 ntBASIC4.9□□□□□ -1.63
SNX18Q96RF0 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.9□□□□□ -1.63
SNX18Q96RF0 AL451074.6-201ENST00000608512 729 ntBASIC4.9□□□□□ -1.63
SNX18Q96RF0 AL451049.1-201ENST00000608672 497 ntBASIC4.9□□□□□ -1.63
SNX18Q96RF0 MIR7973-1-201ENST00000614683 76 ntBASIC4.9□□□□□ -1.63
SNX18Q96RF0 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.9□□□□□ -1.63
SNX18Q96RF0 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SNX18Q96RF0 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.9□□□□□ -1.63
SNX18Q96RF0 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.9□□□□□ -1.63
SNX18Q96RF0 RNF6P1-201ENST00000444889 1784 ntBASIC4.9□□□□□ -1.63
SNX18Q96RF0 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
SNX18Q96RF0 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
SNX18Q96RF0 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.9□□□□□ -1.63
SNX18Q96RF0 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
SNX18Q96RF0 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
SNX18Q96RF0 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SNX18Q96RF0 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
SNX18Q96RF0 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SNX18Q96RF0 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SNX18Q96RF0 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SNX18Q96RF0 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SNX18Q96RF0 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SNX18Q96RF0 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SNX18Q96RF0 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SNX18Q96RF0 RNA5SP46-201ENST00000362370 120 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 RN7SKP6-201ENST00000364795 319 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SNX18Q96RF0 OR52E6-202ENST00000379946 954 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 Y_RNA.560-201ENST00000384689 102 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 MIR143-201ENST00000385300 106 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 TAF9BP1-201ENST00000396646 746 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 AL355379.1-201ENST00000405542 640 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 AL391361.1-201ENST00000405580 489 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 NRBF2P2-201ENST00000413087 861 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 RPSAP35-201ENST00000413753 818 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 AL009174.1-201ENST00000426577 416 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 OR6D1P-201ENST00000436165 939 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 AC129850.1-201ENST00000436203 508 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.89□□□□□ -1.63
SNX18Q96RF0 TAF9P1-201ENST00000445421 515 ntBASIC4.89□□□□□ -1.63
SNX18Q96RF0 AL606662.1-201ENST00000445763 553 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms