Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 RPL23AP46-201ENST00000438548 490 ntBASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 RPS3AP46-201ENST00000448352 682 ntBASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 AC073387.1-201ENST00000453261 709 ntBASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 CREM-238ENST00000488741 651 ntTSL 2 BASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 AC091516.1-201ENST00000549191 703 ntBASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 AC027176.2-201ENST00000559166 746 ntBASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 AC003985.2-201ENST00000562268 1669 ntBASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CSMD1Q96PZ7 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
CSMD1Q96PZ7 LRRC37A9P-201ENST00000603850 5376 ntBASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 AL133268.1-201ENST00000405676 1401 ntBASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 RNA5SP247-201ENST00000411181 105 ntBASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 AL352979.3-201ENST00000553515 247 ntBASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 AC064801.1-201ENST00000612025 407 ntBASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 MIR449A-201ENST00000362113 91 ntBASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 EI24P3-201ENST00000399046 1062 ntBASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 AC096644.3-201ENST00000416788 338 ntBASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 UBE2V1P1-201ENST00000430836 445 ntBASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 BTF3P5-201ENST00000457252 467 ntBASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 AC011825.1-201ENST00000484967 388 ntBASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 HMGN1P11-201ENST00000508668 303 ntBASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 RNA5SP303-201ENST00000516192 130 ntBASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 IGHV3-32-201ENST00000519182 355 ntBASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 AL359219.2-201ENST00000555184 348 ntBASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 AC104984.5-201ENST00000586878 94 ntBASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 AC006386.2-201ENST00000624491 75 ntBASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 AC012005.1-201ENST00000624575 75 ntBASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC3.27□□□□□ -1.89
CSMD1Q96PZ7 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 SNORA60-201ENST00000362396 134 ntBASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 BMS1P3-201ENST00000372011 932 ntBASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 RPL7P60-201ENST00000397636 735 ntBASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 S100A11P2-201ENST00000467589 312 ntBASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 AC139783.2-201ENST00000504847 1145 ntBASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 COX6B1P6-201ENST00000522347 255 ntBASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 DENND2C-201ENST00000393274 6163 ntTSL 5 BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 AL359643.1-201ENST00000404109 423 ntBASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 AC138409.2-202ENST00000507274 458 ntBASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 NCAPGP2-201ENST00000557911 754 ntBASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 AC007529.1-201ENST00000418574 2178 ntBASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CSMD1Q96PZ7 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms