Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 RNA5SP242-201ENST00000364171 118 ntBASIC7.41□□□□□ -1.22
TRIM47Q96LD4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 AL162578.1-201ENST00000406202 378 ntBASIC7.41□□□□□ -1.22
TRIM47Q96LD4 RNU6ATAC23P-201ENST00000408448 123 ntBASIC7.41□□□□□ -1.22
TRIM47Q96LD4 AC109780.2-201ENST00000413467 845 ntBASIC7.41□□□□□ -1.22
TRIM47Q96LD4 RPL36P18-201ENST00000419316 318 ntBASIC7.41□□□□□ -1.22
TRIM47Q96LD4 RPL7P11-201ENST00000437586 658 ntBASIC7.41□□□□□ -1.22
TRIM47Q96LD4 RPL7P54-201ENST00000438336 674 ntBASIC7.41□□□□□ -1.22
TRIM47Q96LD4 HMGB1P18-201ENST00000438801 619 ntBASIC7.41□□□□□ -1.22
TRIM47Q96LD4 DNAJC19P5-201ENST00000443295 316 ntBASIC7.41□□□□□ -1.22
TRIM47Q96LD4 AC073415.1-201ENST00000449240 153 ntBASIC7.41□□□□□ -1.22
TRIM47Q96LD4 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 AC124945.1-201ENST00000485133 188 ntBASIC7.41□□□□□ -1.22
TRIM47Q96LD4 ACTG1P13-201ENST00000486987 1043 ntBASIC7.41□□□□□ -1.22
TRIM47Q96LD4 RN7SL629P-201ENST00000489622 285 ntBASIC7.41□□□□□ -1.22
TRIM47Q96LD4 AC131392.1-201ENST00000506490 633 ntBASIC7.41□□□□□ -1.22
TRIM47Q96LD4 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 KLHL2P1-201ENST00000508691 521 ntBASIC7.41□□□□□ -1.22
TRIM47Q96LD4 PRMT5P1-201ENST00000514351 598 ntBASIC7.41□□□□□ -1.22
TRIM47Q96LD4 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 RN7SKP238-201ENST00000516483 249 ntBASIC7.41□□□□□ -1.22
TRIM47Q96LD4 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 RNU6-988P-201ENST00000519081 107 ntBASIC7.41□□□□□ -1.22
TRIM47Q96LD4 CASC19-203ENST00000523510 575 ntTSL 3 BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 IGLV3-6-201ENST00000523937 250 ntBASIC7.41□□□□□ -1.22
TRIM47Q96LD4 KCTD9P4-201ENST00000526766 1166 ntBASIC7.41□□□□□ -1.22
TRIM47Q96LD4 AC087276.1-201ENST00000529659 480 ntBASIC7.41□□□□□ -1.22
TRIM47Q96LD4 AP002404.1-201ENST00000532005 451 ntBASIC7.41□□□□□ -1.22
TRIM47Q96LD4 AC087241.2-201ENST00000535801 324 ntBASIC7.41□□□□□ -1.22
TRIM47Q96LD4 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 AC067852.5-201ENST00000589299 310 ntBASIC7.41□□□□□ -1.22
TRIM47Q96LD4 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 AC020914.6-201ENST00000594327 272 ntBASIC7.41□□□□□ -1.22
TRIM47Q96LD4 AP004372.1-201ENST00000604842 844 ntBASIC7.41□□□□□ -1.22
TRIM47Q96LD4 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 AL445670.1-201ENST00000618889 801 ntBASIC7.41□□□□□ -1.22
TRIM47Q96LD4 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 AC073055.1-201ENST00000456901 1621 ntBASIC7.41□□□□□ -1.22
TRIM47Q96LD4 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
TRIM47Q96LD4 AP000866.6-201ENST00000638898 3579 ntBASIC7.4□□□□□ -1.22
TRIM47Q96LD4 TMEM75-201ENST00000624314 2165 ntBASIC7.4□□□□□ -1.22
TRIM47Q96LD4 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
TRIM47Q96LD4 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
TRIM47Q96LD4 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
TRIM47Q96LD4 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.4□□□□□ -1.22
TRIM47Q96LD4 OR11H4-201ENST00000315409 1082 ntBASIC7.4□□□□□ -1.22
TRIM47Q96LD4 Y_RNA.28-201ENST00000362554 111 ntBASIC7.4□□□□□ -1.22
TRIM47Q96LD4 RNA5SP477-201ENST00000362639 119 ntBASIC7.4□□□□□ -1.22
TRIM47Q96LD4 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.4□□□□□ -1.22
TRIM47Q96LD4 RNU2-8P-201ENST00000410727 190 ntBASIC7.4□□□□□ -1.22
TRIM47Q96LD4 RNU6-373P-201ENST00000411247 98 ntBASIC7.4□□□□□ -1.22
TRIM47Q96LD4 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
TRIM47Q96LD4 MTND4LP17-201ENST00000414607 293 ntBASIC7.4□□□□□ -1.22
TRIM47Q96LD4 AC096644.3-201ENST00000416788 338 ntBASIC7.4□□□□□ -1.22
TRIM47Q96LD4 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
TRIM47Q96LD4 AC127526.2-201ENST00000426436 775 ntBASIC7.4□□□□□ -1.22
TRIM47Q96LD4 VDAC1P6-201ENST00000430062 855 ntBASIC7.4□□□□□ -1.22
TRIM47Q96LD4 SEPT14P3-201ENST00000439401 183 ntBASIC7.4□□□□□ -1.22
TRIM47Q96LD4 AL732372.2-207ENST00000445840 183 ntBASIC7.4□□□□□ -1.22
TRIM47Q96LD4 RPL23AP20-201ENST00000447965 421 ntBASIC7.4□□□□□ -1.22
TRIM47Q96LD4 SEPT14P2-201ENST00000453405 183 ntBASIC7.4□□□□□ -1.22
TRIM47Q96LD4 HMGB3P17-201ENST00000504195 649 ntBASIC7.4□□□□□ -1.22
TRIM47Q96LD4 AC008638.1-201ENST00000506035 866 ntBASIC7.4□□□□□ -1.22
TRIM47Q96LD4 AC105417.1-201ENST00000514691 285 ntBASIC7.4□□□□□ -1.22
TRIM47Q96LD4 RNU6ATAC39P-201ENST00000516309 149 ntBASIC7.4□□□□□ -1.22
TRIM47Q96LD4 IGHV3-57-201ENST00000520143 280 ntBASIC7.4□□□□□ -1.22
TRIM47Q96LD4 AC022634.1-201ENST00000520765 532 ntBASIC7.4□□□□□ -1.22
TRIM47Q96LD4 AC107953.1-201ENST00000522216 297 ntBASIC7.4□□□□□ -1.22
TRIM47Q96LD4 FO082796.1-201ENST00000523795 183 ntBASIC7.4□□□□□ -1.22
TRIM47Q96LD4 WDR61-205ENST00000558459 884 ntTSL 3 BASIC7.4□□□□□ -1.22
TRIM47Q96LD4 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC7.4□□□□□ -1.22
TRIM47Q96LD4 FRG2DP-202ENST00000566967 323 ntBASIC7.4□□□□□ -1.22
TRIM47Q96LD4 SUMO2P14-201ENST00000604488 293 ntBASIC7.4□□□□□ -1.22
TRIM47Q96LD4 AC007938.3-201ENST00000604965 623 ntBASIC7.4□□□□□ -1.22
TRIM47Q96LD4 AC018695.5-201ENST00000605872 315 ntBASIC7.4□□□□□ -1.22
TRIM47Q96LD4 AC084781.2-201ENST00000615568 161 ntBASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms