Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.68□□□□□ -1.66
VMP1Q96GC9 MAPK10-320ENST00000641462 6696 ntBASIC4.68□□□□□ -1.66
VMP1Q96GC9 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
VMP1Q96GC9 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
VMP1Q96GC9 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
VMP1Q96GC9 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VMP1Q96GC9 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VMP1Q96GC9 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VMP1Q96GC9 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.67□□□□□ -1.66
VMP1Q96GC9 A2MP1-204ENST00000566278 4130 ntBASIC4.67□□□□□ -1.66
VMP1Q96GC9 AC007685.1-201ENST00000329806 452 ntBASIC4.67□□□□□ -1.66
VMP1Q96GC9 RNU6-1339P-201ENST00000363574 91 ntBASIC4.67□□□□□ -1.66
VMP1Q96GC9 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
VMP1Q96GC9 MIR550A3-201ENST00000390735 95 ntBASIC4.67□□□□□ -1.66
VMP1Q96GC9 AL109941.1-201ENST00000401925 229 ntBASIC4.67□□□□□ -1.66
VMP1Q96GC9 U3.32-201ENST00000408116 212 ntBASIC4.67□□□□□ -1.66
VMP1Q96GC9 RNU2-21P-201ENST00000410368 188 ntBASIC4.67□□□□□ -1.66
VMP1Q96GC9 AC016769.2-201ENST00000414815 475 ntBASIC4.67□□□□□ -1.66
VMP1Q96GC9 RPS15AP40-201ENST00000419621 391 ntBASIC4.67□□□□□ -1.66
VMP1Q96GC9 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.67□□□□□ -1.66
VMP1Q96GC9 AL121882.1-201ENST00000422893 417 ntBASIC4.67□□□□□ -1.66
VMP1Q96GC9 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.67□□□□□ -1.66
VMP1Q96GC9 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.67□□□□□ -1.66
VMP1Q96GC9 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VMP1Q96GC9 TCEA1P1-201ENST00000449716 880 ntBASIC4.67□□□□□ -1.66
VMP1Q96GC9 PPIAP3-201ENST00000450588 505 ntBASIC4.67□□□□□ -1.66
VMP1Q96GC9 HIGD1AP8-201ENST00000453927 274 ntBASIC4.67□□□□□ -1.66
VMP1Q96GC9 RPL23AP37-201ENST00000479658 549 ntBASIC4.67□□□□□ -1.66
VMP1Q96GC9 RN7SL319P-201ENST00000480656 221 ntBASIC4.67□□□□□ -1.66
VMP1Q96GC9 RN7SL205P-201ENST00000490174 284 ntBASIC4.67□□□□□ -1.66
VMP1Q96GC9 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.67□□□□□ -1.66
VMP1Q96GC9 AC020593.1-201ENST00000507399 299 ntBASIC4.67□□□□□ -1.66
VMP1Q96GC9 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.67□□□□□ -1.66
VMP1Q96GC9 AC110775.1-201ENST00000513721 462 ntBASIC4.67□□□□□ -1.66
VMP1Q96GC9 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.67□□□□□ -1.66
VMP1Q96GC9 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.67□□□□□ -1.66
VMP1Q96GC9 OR8K2P-201ENST00000524645 927 ntBASIC4.67□□□□□ -1.66
VMP1Q96GC9 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.67□□□□□ -1.66
VMP1Q96GC9 AP001922.4-201ENST00000526967 290 ntBASIC4.67□□□□□ -1.66
VMP1Q96GC9 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.67□□□□□ -1.66
VMP1Q96GC9 RFPL1S-203ENST00000539579 330 ntBASIC4.67□□□□□ -1.66
VMP1Q96GC9 TOMM20P2-201ENST00000540082 421 ntBASIC4.67□□□□□ -1.66
VMP1Q96GC9 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VMP1Q96GC9 PCNPP1-201ENST00000552501 511 ntBASIC4.67□□□□□ -1.66
VMP1Q96GC9 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.67□□□□□ -1.66
VMP1Q96GC9 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.67□□□□□ -1.66
VMP1Q96GC9 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.67□□□□□ -1.66
VMP1Q96GC9 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.67□□□□□ -1.66
VMP1Q96GC9 AC124068.1-201ENST00000563131 678 ntBASIC4.67□□□□□ -1.66
VMP1Q96GC9 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.67□□□□□ -1.66
VMP1Q96GC9 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.67□□□□□ -1.66
VMP1Q96GC9 ATP5F1P7-201ENST00000567330 760 ntBASIC4.67□□□□□ -1.66
VMP1Q96GC9 EIF1P5-201ENST00000585002 234 ntBASIC4.67□□□□□ -1.66
VMP1Q96GC9 ADAD1P2-201ENST00000588476 646 ntBASIC4.67□□□□□ -1.66
VMP1Q96GC9 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.67□□□□□ -1.66
VMP1Q96GC9 AC103792.1-201ENST00000603591 919 ntBASIC4.67□□□□□ -1.66
VMP1Q96GC9 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.67□□□□□ -1.66
VMP1Q96GC9 uc_338.32-201ENST00000615087 172 ntBASIC4.67□□□□□ -1.66
VMP1Q96GC9 AC018926.3-201ENST00000618841 406 ntBASIC4.67□□□□□ -1.66
VMP1Q96GC9 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.67□□□□□ -1.66
VMP1Q96GC9 FAM157B-203ENST00000639350 358 ntBASIC4.67□□□□□ -1.66
VMP1Q96GC9 AC011266.1-201ENST00000624119 3569 ntBASIC4.67□□□□□ -1.66
VMP1Q96GC9 AC106871.1-201ENST00000568324 3102 ntBASIC4.67□□□□□ -1.66
VMP1Q96GC9 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
VMP1Q96GC9 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.67□□□□□ -1.66
VMP1Q96GC9 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
VMP1Q96GC9 AC083899.2-201ENST00000423285 1376 ntBASIC4.66□□□□□ -1.66
VMP1Q96GC9 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
VMP1Q96GC9 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VMP1Q96GC9 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VMP1Q96GC9 RN7SKP95-201ENST00000362860 303 ntBASIC4.66□□□□□ -1.66
VMP1Q96GC9 AL133270.1-201ENST00000402635 279 ntBASIC4.66□□□□□ -1.66
VMP1Q96GC9 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.66□□□□□ -1.66
VMP1Q96GC9 CHEK2P3-201ENST00000416118 248 ntBASIC4.66□□□□□ -1.66
VMP1Q96GC9 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.66□□□□□ -1.66
VMP1Q96GC9 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.66□□□□□ -1.66
VMP1Q96GC9 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.66□□□□□ -1.66
VMP1Q96GC9 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.66□□□□□ -1.66
VMP1Q96GC9 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.66□□□□□ -1.66
VMP1Q96GC9 snoU13.7-201ENST00000459220 104 ntBASIC4.66□□□□□ -1.66
VMP1Q96GC9 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.66□□□□□ -1.66
VMP1Q96GC9 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.66□□□□□ -1.66
VMP1Q96GC9 AC092045.1-201ENST00000495716 1231 ntBASIC4.66□□□□□ -1.66
VMP1Q96GC9 COL6A4P2-205ENST00000509855 506 ntBASIC4.66□□□□□ -1.66
VMP1Q96GC9 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.66□□□□□ -1.66
VMP1Q96GC9 MTND2P26-201ENST00000528255 1029 ntBASIC4.66□□□□□ -1.66
VMP1Q96GC9 OR5D15P-201ENST00000531671 942 ntBASIC4.66□□□□□ -1.66
VMP1Q96GC9 CENPUP2-201ENST00000555897 1186 ntBASIC4.66□□□□□ -1.66
VMP1Q96GC9 AC104229.1-201ENST00000561364 255 ntBASIC4.66□□□□□ -1.66
VMP1Q96GC9 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.66□□□□□ -1.66
VMP1Q96GC9 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.66□□□□□ -1.66
VMP1Q96GC9 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.66□□□□□ -1.66
VMP1Q96GC9 AC005255.1-201ENST00000593748 216 ntBASIC4.66□□□□□ -1.66
VMP1Q96GC9 AC005377.1-201ENST00000605126 456 ntBASIC4.66□□□□□ -1.66
VMP1Q96GC9 AC005084.1-201ENST00000605160 304 ntBASIC4.66□□□□□ -1.66
VMP1Q96GC9 AL121873.1-201ENST00000616013 524 ntBASIC4.66□□□□□ -1.66
VMP1Q96GC9 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.66□□□□□ -1.66
VMP1Q96GC9 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.66□□□□□ -1.66
VMP1Q96GC9 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.66□□□□□ -1.66
VMP1Q96GC9 MAPK10-263ENST00000641052 4307 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms