Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.16□□□□□ -1.58
ATG4AQ8WYN0 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
ATG4AQ8WYN0 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
ATG4AQ8WYN0 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
ATG4AQ8WYN0 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 RN7SKP149-201ENST00000363008 344 ntBASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 SNORA62.2-201ENST00000364672 152 ntBASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 RNU6-729P-201ENST00000384399 107 ntBASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 AL078599.1-201ENST00000402075 293 ntBASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 AL136131.1-201ENST00000406079 803 ntBASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 SETP15-201ENST00000412724 337 ntBASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 SLC35E1P1-201ENST00000419313 864 ntBASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 AC096638.2-201ENST00000434965 711 ntBASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 ATP5C1P1-201ENST00000441945 895 ntBASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 RHEBP2-201ENST00000450289 600 ntBASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 AC092647.2-201ENST00000452998 253 ntBASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 RPS4XP12-201ENST00000461747 709 ntBASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 MTND3P7-201ENST00000474435 343 ntBASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 AC090114.3-201ENST00000479267 829 ntBASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 AC117532.1-201ENST00000514638 323 ntBASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 RNU6-232P-201ENST00000517144 64 ntBASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 AP000619.3-201ENST00000535634 1127 ntBASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 AP002373.2-201ENST00000541631 1060 ntBASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 AL049779.2-201ENST00000553847 315 ntBASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 NIFKP8-201ENST00000560500 874 ntBASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 AC105254.2-201ENST00000603636 436 ntBASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 AC106791.2-201ENST00000604680 391 ntBASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 AC015871.5-202ENST00000623252 701 ntBASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 AC010608.2-201ENST00000624830 470 ntBASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 CASC19-264ENST00000641912 1184 ntBASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 HSPA8P14-201ENST00000552265 1805 ntBASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.15□□□□□ -1.59
ATG4AQ8WYN0 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 FAM3C2-201ENST00000312214 681 ntBASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 Y_RNA.201-201ENST00000364052 96 ntBASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 UBBP2-201ENST00000376781 231 ntBASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 Y_RNA.436-201ENST00000384097 102 ntBASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 OR3A2-201ENST00000408891 1076 ntBASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 RNU6-77P-201ENST00000410554 91 ntBASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 RNU6-575P-201ENST00000411326 105 ntBASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 TMBIM7P-201ENST00000418074 855 ntBASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 RPL34P20-201ENST00000442771 351 ntBASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 SPRYD7P1-201ENST00000443861 570 ntBASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 AL606490.1-201ENST00000452266 765 ntBASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 AL109741.2-201ENST00000455561 343 ntBASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 RNU7-27P-201ENST00000459281 62 ntBASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 AC073522.1-201ENST00000483312 377 ntBASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 LINC00888-204ENST00000487386 421 ntBASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.14□□□□□ -1.59
ATG4AQ8WYN0 IGJP1-201ENST00000522682 475 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms