Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC139495.1-202ENST00000513164 354 ntBASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 RNA5SP360-201ENST00000516555 118 ntBASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 IPO5P1-202ENST00000600039 287 ntBASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 AL161729.3-201ENST00000603533 673 ntBASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 AC007179.3-201ENST00000604976 235 ntBASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 AL591424.2-201ENST00000617023 128 ntBASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 AC108032.1-201ENST00000416706 207 ntBASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 AC012123.2-201ENST00000485809 248 ntBASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 RNA5SP497-201ENST00000516081 97 ntBASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 VN1R92P-201ENST00000598511 928 ntBASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 AC012468.1-201ENST00000604888 430 ntBASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 AC007342.8-201ENST00000623278 678 ntBASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.2□□□□□ -1.74
SHROOM3Q8TF72 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.19□□□□□ -1.74
SHROOM3Q8TF72 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
SHROOM3Q8TF72 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SHROOM3Q8TF72 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
SHROOM3Q8TF72 AC016588.2-201ENST00000632484 3021 ntBASIC4.19□□□□□ -1.74
SHROOM3Q8TF72 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SHROOM3Q8TF72 AL442128.2-201ENST00000620246 1824 ntBASIC4.19□□□□□ -1.74
SHROOM3Q8TF72 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SHROOM3Q8TF72 AC114814.2-201ENST00000419195 485 ntBASIC4.19□□□□□ -1.74
SHROOM3Q8TF72 AL117339.2-201ENST00000430475 180 ntBASIC4.19□□□□□ -1.74
SHROOM3Q8TF72 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.19□□□□□ -1.74
SHROOM3Q8TF72 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.19□□□□□ -1.74
SHROOM3Q8TF72 RPS20P4-201ENST00000461659 355 ntBASIC4.19□□□□□ -1.74
SHROOM3Q8TF72 RPL29P14-201ENST00000495837 428 ntBASIC4.19□□□□□ -1.74
SHROOM3Q8TF72 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.19□□□□□ -1.74
SHROOM3Q8TF72 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.19□□□□□ -1.74
SHROOM3Q8TF72 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.19□□□□□ -1.74
SHROOM3Q8TF72 AC012603.1-201ENST00000606424 528 ntBASIC4.19□□□□□ -1.74
SHROOM3Q8TF72 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.19□□□□□ -1.74
SHROOM3Q8TF72 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SHROOM3Q8TF72 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SHROOM3Q8TF72 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.19□□□□□ -1.74
SHROOM3Q8TF72 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.19□□□□□ -1.74
SHROOM3Q8TF72 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.18□□□□□ -1.74
SHROOM3Q8TF72 AC092447.2-201ENST00000435487 669 ntBASIC4.18□□□□□ -1.74
SHROOM3Q8TF72 RPS29P7-201ENST00000439662 171 ntBASIC4.18□□□□□ -1.74
SHROOM3Q8TF72 BNIP3P41-201ENST00000503774 571 ntBASIC4.18□□□□□ -1.74
SHROOM3Q8TF72 HPRT1P2-201ENST00000505250 544 ntBASIC4.18□□□□□ -1.74
SHROOM3Q8TF72 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.18□□□□□ -1.74
SHROOM3Q8TF72 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.18□□□□□ -1.74
SHROOM3Q8TF72 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.18□□□□□ -1.74
SHROOM3Q8TF72 MIR5684-201ENST00000585074 65 ntBASIC4.18□□□□□ -1.74
SHROOM3Q8TF72 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.18□□□□□ -1.74
SHROOM3Q8TF72 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
SHROOM3Q8TF72 AC007529.1-201ENST00000418574 2178 ntBASIC4.18□□□□□ -1.74
SHROOM3Q8TF72 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SHROOM3Q8TF72 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.18□□□□□ -1.74
SHROOM3Q8TF72 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
SHROOM3Q8TF72 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SHROOM3Q8TF72 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
SHROOM3Q8TF72 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SHROOM3Q8TF72 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.18□□□□□ -1.74
SHROOM3Q8TF72 DPPA2P2-201ENST00000418220 897 ntBASIC4.18□□□□□ -1.74
SHROOM3Q8TF72 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.18□□□□□ -1.74
SHROOM3Q8TF72 HMGB1P19-201ENST00000517578 577 ntBASIC4.18□□□□□ -1.74
SHROOM3Q8TF72 CR392039.5-201ENST00000623201 510 ntBASIC4.18□□□□□ -1.74
SHROOM3Q8TF72 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SHROOM3Q8TF72 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.18□□□□□ -1.74
SHROOM3Q8TF72 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SHROOM3Q8TF72 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SHROOM3Q8TF72 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SHROOM3Q8TF72 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.17□□□□□ -1.74
SHROOM3Q8TF72 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.17□□□□□ -1.74
SHROOM3Q8TF72 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.17□□□□□ -1.74
SHROOM3Q8TF72 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
SHROOM3Q8TF72 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.17□□□□□ -1.74
SHROOM3Q8TF72 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SHROOM3Q8TF72 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SHROOM3Q8TF72 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.17□□□□□ -1.74
SHROOM3Q8TF72 RBMY1KP-201ENST00000423480 476 ntBASIC4.17□□□□□ -1.74
SHROOM3Q8TF72 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
SHROOM3Q8TF72 AC010469.1-201ENST00000463864 576 ntBASIC4.17□□□□□ -1.74
SHROOM3Q8TF72 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.17□□□□□ -1.74
SHROOM3Q8TF72 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.17□□□□□ -1.74
SHROOM3Q8TF72 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SHROOM3Q8TF72 STMN1P2-201ENST00000508435 439 ntBASIC4.17□□□□□ -1.74
SHROOM3Q8TF72 RNA5SP179-201ENST00000517284 121 ntBASIC4.17□□□□□ -1.74
SHROOM3Q8TF72 AC120057.2-201ENST00000571520 271 ntBASIC4.17□□□□□ -1.74
SHROOM3Q8TF72 RN7SL600P-201ENST00000581811 299 ntBASIC4.17□□□□□ -1.74
SHROOM3Q8TF72 AC114878.2-201ENST00000604863 1251 ntBASIC4.17□□□□□ -1.74
SHROOM3Q8TF72 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms