Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.89□□□□□ -1.63
PRPF39Q86UA1 SCN1A-220ENST00000641603 12506 ntBASIC4.89□□□□□ -1.63
PRPF39Q86UA1 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PRPF39Q86UA1 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
PRPF39Q86UA1 AC021242.1-201ENST00000507315 2035 ntBASIC4.89□□□□□ -1.63
PRPF39Q86UA1 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
PRPF39Q86UA1 TLK1P1-201ENST00000456760 2440 ntBASIC4.88□□□□□ -1.63
PRPF39Q86UA1 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.88□□□□□ -1.63
PRPF39Q86UA1 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PRPF39Q86UA1 AL592494.2-201ENST00000425455 1548 ntBASIC4.88□□□□□ -1.63
PRPF39Q86UA1 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PRPF39Q86UA1 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
PRPF39Q86UA1 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PRPF39Q86UA1 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PRPF39Q86UA1 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PRPF39Q86UA1 MIR525-201ENST00000384978 85 ntBASIC4.88□□□□□ -1.63
PRPF39Q86UA1 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PRPF39Q86UA1 ARL4AP5-201ENST00000404372 599 ntBASIC4.88□□□□□ -1.63
PRPF39Q86UA1 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.88□□□□□ -1.63
PRPF39Q86UA1 BX510359.2-201ENST00000417920 305 ntBASIC4.88□□□□□ -1.63
PRPF39Q86UA1 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.88□□□□□ -1.63
PRPF39Q86UA1 LINC00993-201ENST00000420453 540 ntBASIC4.88□□□□□ -1.63
PRPF39Q86UA1 AC004074.1-201ENST00000421810 1063 ntBASIC4.88□□□□□ -1.63
PRPF39Q86UA1 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.88□□□□□ -1.63
PRPF39Q86UA1 FABP7P1-201ENST00000424004 391 ntBASIC4.88□□□□□ -1.63
PRPF39Q86UA1 DNAJC19P7-201ENST00000428811 344 ntBASIC4.88□□□□□ -1.63
PRPF39Q86UA1 AL512637.2-201ENST00000431287 1256 ntBASIC4.88□□□□□ -1.63
PRPF39Q86UA1 RPS17P8-201ENST00000434525 335 ntBASIC4.88□□□□□ -1.63
PRPF39Q86UA1 AL451139.1-201ENST00000434718 346 ntBASIC4.88□□□□□ -1.63
PRPF39Q86UA1 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.88□□□□□ -1.63
PRPF39Q86UA1 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.88□□□□□ -1.63
PRPF39Q86UA1 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.88□□□□□ -1.63
PRPF39Q86UA1 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.88□□□□□ -1.63
PRPF39Q86UA1 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.88□□□□□ -1.63
PRPF39Q86UA1 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.88□□□□□ -1.63
PRPF39Q86UA1 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.88□□□□□ -1.63
PRPF39Q86UA1 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.88□□□□□ -1.63
PRPF39Q86UA1 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.88□□□□□ -1.63
PRPF39Q86UA1 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
PRPF39Q86UA1 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.88□□□□□ -1.63
PRPF39Q86UA1 OR4A2P-201ENST00000527276 913 ntBASIC4.88□□□□□ -1.63
PRPF39Q86UA1 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.88□□□□□ -1.63
PRPF39Q86UA1 AC011611.5-201ENST00000552477 578 ntBASIC4.88□□□□□ -1.63
PRPF39Q86UA1 FKBP1BP1-201ENST00000553366 325 ntBASIC4.88□□□□□ -1.63
PRPF39Q86UA1 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.88□□□□□ -1.63
PRPF39Q86UA1 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.88□□□□□ -1.63
PRPF39Q86UA1 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.88□□□□□ -1.63
PRPF39Q86UA1 AC124283.4-201ENST00000581815 456 ntBASIC4.88□□□□□ -1.63
PRPF39Q86UA1 AC022726.1-201ENST00000587475 207 ntBASIC4.88□□□□□ -1.63
PRPF39Q86UA1 AC012414.7-202ENST00000622705 1090 ntBASIC4.88□□□□□ -1.63
PRPF39Q86UA1 MIR7641-1-201ENST00000627518 61 ntBASIC4.88□□□□□ -1.63
PRPF39Q86UA1 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.88□□□□□ -1.63
PRPF39Q86UA1 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
PRPF39Q86UA1 AL132640.2-201ENST00000559968 1698 ntBASIC4.88□□□□□ -1.63
PRPF39Q86UA1 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PRPF39Q86UA1 AP001273.1-201ENST00000624493 3152 ntBASIC4.88□□□□□ -1.63
PRPF39Q86UA1 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.88□□□□□ -1.63
PRPF39Q86UA1 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PRPF39Q86UA1 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
PRPF39Q86UA1 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
PRPF39Q86UA1 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PRPF39Q86UA1 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.87□□□□□ -1.63
PRPF39Q86UA1 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
PRPF39Q86UA1 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PRPF39Q86UA1 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PRPF39Q86UA1 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
PRPF39Q86UA1 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PRPF39Q86UA1 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PRPF39Q86UA1 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
PRPF39Q86UA1 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PRPF39Q86UA1 RNU6-1339P-201ENST00000363574 91 ntBASIC4.87□□□□□ -1.63
PRPF39Q86UA1 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.87□□□□□ -1.63
PRPF39Q86UA1 RN7SKP247-201ENST00000411094 308 ntBASIC4.87□□□□□ -1.63
PRPF39Q86UA1 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.87□□□□□ -1.63
PRPF39Q86UA1 AC073136.2-201ENST00000417282 849 ntBASIC4.87□□□□□ -1.63
PRPF39Q86UA1 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.87□□□□□ -1.63
PRPF39Q86UA1 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.87□□□□□ -1.63
PRPF39Q86UA1 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PRPF39Q86UA1 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.87□□□□□ -1.63
PRPF39Q86UA1 AC068287.1-201ENST00000430283 295 ntBASIC4.87□□□□□ -1.63
PRPF39Q86UA1 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC4.87□□□□□ -1.63
PRPF39Q86UA1 AC006994.1-201ENST00000438212 839 ntBASIC4.87□□□□□ -1.63
PRPF39Q86UA1 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.87□□□□□ -1.63
PRPF39Q86UA1 AL096803.2-201ENST00000450032 677 ntBASIC4.87□□□□□ -1.63
PRPF39Q86UA1 AC010733.1-201ENST00000451515 401 ntBASIC4.87□□□□□ -1.63
PRPF39Q86UA1 RPS5P7-201ENST00000456664 608 ntBASIC4.87□□□□□ -1.63
PRPF39Q86UA1 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.87□□□□□ -1.63
PRPF39Q86UA1 RPL30P11-201ENST00000495304 339 ntBASIC4.87□□□□□ -1.63
PRPF39Q86UA1 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.87□□□□□ -1.63
PRPF39Q86UA1 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PRPF39Q86UA1 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.87□□□□□ -1.63
PRPF39Q86UA1 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.87□□□□□ -1.63
PRPF39Q86UA1 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.87□□□□□ -1.63
PRPF39Q86UA1 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.87□□□□□ -1.63
PRPF39Q86UA1 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.87□□□□□ -1.63
PRPF39Q86UA1 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.87□□□□□ -1.63
PRPF39Q86UA1 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.87□□□□□ -1.63
PRPF39Q86UA1 RN7SL802P-201ENST00000577858 299 ntBASIC4.87□□□□□ -1.63
PRPF39Q86UA1 MIR5699-201ENST00000578903 90 ntBASIC4.87□□□□□ -1.63
PRPF39Q86UA1 ELOCP28-201ENST00000590044 317 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms