Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 AC013403.1-201ENST00000436954 263 ntBASIC5.9□□□□□ -1.46
UBE3DQ7Z6J8 SEPT14P3-201ENST00000439401 183 ntBASIC5.9□□□□□ -1.46
UBE3DQ7Z6J8 AL732372.2-207ENST00000445840 183 ntBASIC5.9□□□□□ -1.46
UBE3DQ7Z6J8 ARPC3P5-201ENST00000448802 534 ntBASIC5.9□□□□□ -1.46
UBE3DQ7Z6J8 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.9□□□□□ -1.46
UBE3DQ7Z6J8 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.9□□□□□ -1.46
UBE3DQ7Z6J8 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.9□□□□□ -1.46
UBE3DQ7Z6J8 SEPT14P2-201ENST00000453405 183 ntBASIC5.9□□□□□ -1.46
UBE3DQ7Z6J8 HIGD1AP8-201ENST00000453927 274 ntBASIC5.9□□□□□ -1.46
UBE3DQ7Z6J8 YRDCP3-201ENST00000456507 480 ntBASIC5.9□□□□□ -1.46
UBE3DQ7Z6J8 MTND1P3-201ENST00000484956 952 ntBASIC5.9□□□□□ -1.46
UBE3DQ7Z6J8 AC023194.1-201ENST00000493084 308 ntBASIC5.9□□□□□ -1.46
UBE3DQ7Z6J8 NIPA2P2-201ENST00000496376 1083 ntBASIC5.9□□□□□ -1.46
UBE3DQ7Z6J8 AC092349.1-201ENST00000504903 310 ntBASIC5.9□□□□□ -1.46
UBE3DQ7Z6J8 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.9□□□□□ -1.46
UBE3DQ7Z6J8 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.9□□□□□ -1.46
UBE3DQ7Z6J8 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC5.9□□□□□ -1.46
UBE3DQ7Z6J8 SEPT14P4-201ENST00000513445 186 ntBASIC5.9□□□□□ -1.46
UBE3DQ7Z6J8 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.9□□□□□ -1.46
UBE3DQ7Z6J8 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.9□□□□□ -1.46
UBE3DQ7Z6J8 FO082796.1-201ENST00000523795 183 ntBASIC5.9□□□□□ -1.46
UBE3DQ7Z6J8 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.9□□□□□ -1.46
UBE3DQ7Z6J8 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.9□□□□□ -1.46
UBE3DQ7Z6J8 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC5.9□□□□□ -1.46
UBE3DQ7Z6J8 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.9□□□□□ -1.46
UBE3DQ7Z6J8 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.9□□□□□ -1.46
UBE3DQ7Z6J8 AL157394.1-201ENST00000562983 1224 ntBASIC5.9□□□□□ -1.46
UBE3DQ7Z6J8 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC5.9□□□□□ -1.46
UBE3DQ7Z6J8 OR1E3-201ENST00000575608 948 ntBASIC5.9□□□□□ -1.46
UBE3DQ7Z6J8 HMGN1P30-201ENST00000589286 268 ntBASIC5.9□□□□□ -1.46
UBE3DQ7Z6J8 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.9□□□□□ -1.46
UBE3DQ7Z6J8 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC5.9□□□□□ -1.46
UBE3DQ7Z6J8 AC116667.2-201ENST00000641075 823 ntBASIC5.9□□□□□ -1.46
UBE3DQ7Z6J8 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
UBE3DQ7Z6J8 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.9□□□□□ -1.47
UBE3DQ7Z6J8 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.9□□□□□ -1.47
UBE3DQ7Z6J8 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
UBE3DQ7Z6J8 AC093225.1-201ENST00000506867 1408 ntBASIC5.9□□□□□ -1.47
UBE3DQ7Z6J8 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
UBE3DQ7Z6J8 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.9□□□□□ -1.47
UBE3DQ7Z6J8 AP003486.1-201ENST00000525716 3994 ntBASIC5.9□□□□□ -1.47
UBE3DQ7Z6J8 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 AC010168.2-201ENST00000562691 5428 ntBASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 AC025574.1-201ENST00000554784 1653 ntBASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 AC011416.1-201ENST00000514947 1732 ntBASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 RNA5SP110-201ENST00000362638 115 ntBASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 SNORA70H-201ENST00000383910 135 ntBASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 SNORA70J-201ENST00000384182 135 ntBASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 MIR188-201ENST00000385034 86 ntBASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 RNU1-149P-201ENST00000390870 161 ntBASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 AC104297.1-201ENST00000393779 870 ntBASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 AL035422.1-201ENST00000414193 397 ntBASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 SNRPFP1-201ENST00000414761 252 ntBASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 RPS17P17-201ENST00000419392 409 ntBASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 RPL7P57-201ENST00000423238 740 ntBASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 PRUNEP1-201ENST00000425846 705 ntBASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 AL354707.3-201ENST00000427308 331 ntBASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 GAPDHP59-201ENST00000435908 267 ntBASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 LSM1P1-201ENST00000438629 273 ntBASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 ACTR3P2-201ENST00000439585 1257 ntBASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 AL645936.1-201ENST00000441979 518 ntBASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 AC007383.1-201ENST00000445875 636 ntBASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 HMGN1P36-201ENST00000446623 298 ntBASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 AC096741.1-201ENST00000472250 846 ntBASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 AL355032.1-201ENST00000472981 438 ntBASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 AC013356.1-201ENST00000489027 564 ntBASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 RN7SL568P-201ENST00000493069 298 ntBASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 AC006390.1-201ENST00000508068 283 ntBASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 MTND6P2-201ENST00000512226 524 ntBASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 RNA5SP434-201ENST00000516647 121 ntBASIC5.89□□□□□ -1.47
UBE3DQ7Z6J8 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 147.6 ms