Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.37□□□□□ -1.71
C11orf88Q6PI97 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.37□□□□□ -1.71
C11orf88Q6PI97 AL352979.3-201ENST00000553515 247 ntBASIC4.37□□□□□ -1.71
C11orf88Q6PI97 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.37□□□□□ -1.71
C11orf88Q6PI97 AC119501.1-201ENST00000603646 475 ntBASIC4.37□□□□□ -1.71
C11orf88Q6PI97 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.37□□□□□ -1.71
C11orf88Q6PI97 AL009028.1-201ENST00000604895 802 ntBASIC4.37□□□□□ -1.71
C11orf88Q6PI97 AL021707.7-201ENST00000607991 416 ntBASIC4.37□□□□□ -1.71
C11orf88Q6PI97 SNORD91B-202ENST00000608459 222 ntBASIC4.37□□□□□ -1.71
C11orf88Q6PI97 AC078899.5-201ENST00000612475 178 ntBASIC4.37□□□□□ -1.71
C11orf88Q6PI97 MIR7155-201ENST00000615925 56 ntBASIC4.37□□□□□ -1.71
C11orf88Q6PI97 AC078880.5-201ENST00000617845 421 ntBASIC4.37□□□□□ -1.71
C11orf88Q6PI97 AL713922.2-201ENST00000619384 716 ntBASIC4.37□□□□□ -1.71
C11orf88Q6PI97 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
C11orf88Q6PI97 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
C11orf88Q6PI97 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
C11orf88Q6PI97 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
C11orf88Q6PI97 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
C11orf88Q6PI97 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.36□□□□□ -1.71
C11orf88Q6PI97 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
C11orf88Q6PI97 AC103591.2-201ENST00000265259 766 ntBASIC4.36□□□□□ -1.71
C11orf88Q6PI97 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.36□□□□□ -1.71
C11orf88Q6PI97 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
C11orf88Q6PI97 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.36□□□□□ -1.71
C11orf88Q6PI97 SNORA67-201ENST00000384423 137 ntBASIC4.36□□□□□ -1.71
C11orf88Q6PI97 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
C11orf88Q6PI97 SNORA40.4-201ENST00000390971 128 ntBASIC4.36□□□□□ -1.71
C11orf88Q6PI97 RN7SKP126-201ENST00000411143 300 ntBASIC4.36□□□□□ -1.71
C11orf88Q6PI97 RPL23AP27-201ENST00000415161 451 ntBASIC4.36□□□□□ -1.71
C11orf88Q6PI97 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.36□□□□□ -1.71
C11orf88Q6PI97 RPL7P53-201ENST00000421245 739 ntBASIC4.36□□□□□ -1.71
C11orf88Q6PI97 AL139148.1-201ENST00000427122 680 ntBASIC4.36□□□□□ -1.71
C11orf88Q6PI97 UBE2V1P1-201ENST00000430836 445 ntBASIC4.36□□□□□ -1.71
C11orf88Q6PI97 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.36□□□□□ -1.71
C11orf88Q6PI97 AL158053.1-201ENST00000441503 453 ntBASIC4.36□□□□□ -1.71
C11orf88Q6PI97 RPL23AP33-201ENST00000442301 452 ntBASIC4.36□□□□□ -1.71
C11orf88Q6PI97 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.36□□□□□ -1.71
C11orf88Q6PI97 GAPDHP25-201ENST00000447061 1001 ntBASIC4.36□□□□□ -1.71
C11orf88Q6PI97 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.36□□□□□ -1.71
C11orf88Q6PI97 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
C11orf88Q6PI97 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.36□□□□□ -1.71
C11orf88Q6PI97 AC231760.1-201ENST00000498002 260 ntBASIC4.36□□□□□ -1.71
C11orf88Q6PI97 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.36□□□□□ -1.71
C11orf88Q6PI97 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.36□□□□□ -1.71
C11orf88Q6PI97 AC006427.1-201ENST00000514359 712 ntBASIC4.36□□□□□ -1.71
C11orf88Q6PI97 RNU6-488P-201ENST00000515918 99 ntBASIC4.36□□□□□ -1.71
C11orf88Q6PI97 RNU6-416P-201ENST00000516265 103 ntBASIC4.36□□□□□ -1.71
C11orf88Q6PI97 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.36□□□□□ -1.71
C11orf88Q6PI97 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.36□□□□□ -1.71
C11orf88Q6PI97 AC124293.1-201ENST00000530034 493 ntBASIC4.36□□□□□ -1.71
C11orf88Q6PI97 CBX3P5-201ENST00000552017 521 ntBASIC4.36□□□□□ -1.71
C11orf88Q6PI97 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.36□□□□□ -1.71
C11orf88Q6PI97 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.36□□□□□ -1.71
C11orf88Q6PI97 AGGF1P8-201ENST00000562979 1000 ntBASIC4.36□□□□□ -1.71
C11orf88Q6PI97 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.36□□□□□ -1.71
C11orf88Q6PI97 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.36□□□□□ -1.71
C11orf88Q6PI97 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
C11orf88Q6PI97 AC124283.4-201ENST00000581815 456 ntBASIC4.36□□□□□ -1.71
C11orf88Q6PI97 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.36□□□□□ -1.71
C11orf88Q6PI97 VN1R79P-201ENST00000593540 513 ntBASIC4.36□□□□□ -1.71
C11orf88Q6PI97 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.36□□□□□ -1.71
C11orf88Q6PI97 IMMP1LP1-201ENST00000605170 488 ntBASIC4.36□□□□□ -1.71
C11orf88Q6PI97 RPSAP73-201ENST00000614820 330 ntBASIC4.36□□□□□ -1.71
C11orf88Q6PI97 AL356121.2-201ENST00000624715 780 ntBASIC4.36□□□□□ -1.71
C11orf88Q6PI97 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.36□□□□□ -1.71
C11orf88Q6PI97 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
C11orf88Q6PI97 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
C11orf88Q6PI97 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.36□□□□□ -1.71
C11orf88Q6PI97 C4BPAP1-201ENST00000415474 1893 ntBASIC4.36□□□□□ -1.71
C11orf88Q6PI97 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.36□□□□□ -1.71
C11orf88Q6PI97 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
C11orf88Q6PI97 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
C11orf88Q6PI97 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
C11orf88Q6PI97 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
C11orf88Q6PI97 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
C11orf88Q6PI97 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.35□□□□□ -1.71
C11orf88Q6PI97 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
C11orf88Q6PI97 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
C11orf88Q6PI97 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
C11orf88Q6PI97 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.35□□□□□ -1.71
C11orf88Q6PI97 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.35□□□□□ -1.71
C11orf88Q6PI97 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
C11orf88Q6PI97 ZNF603P-201ENST00000405613 487 ntBASIC4.35□□□□□ -1.71
C11orf88Q6PI97 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.35□□□□□ -1.71
C11orf88Q6PI97 FO393414.1-201ENST00000428697 1184 ntBASIC4.35□□□□□ -1.71
C11orf88Q6PI97 CLUHP1-201ENST00000435012 1190 ntBASIC4.35□□□□□ -1.71
C11orf88Q6PI97 USP9YP7-201ENST00000436723 430 ntBASIC4.35□□□□□ -1.71
C11orf88Q6PI97 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.35□□□□□ -1.71
C11orf88Q6PI97 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.35□□□□□ -1.71
C11orf88Q6PI97 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.35□□□□□ -1.71
C11orf88Q6PI97 MRPL48P1-201ENST00000445390 636 ntBASIC4.35□□□□□ -1.71
C11orf88Q6PI97 EIF2S2P2-201ENST00000447161 982 ntBASIC4.35□□□□□ -1.71
C11orf88Q6PI97 NOP56P2-201ENST00000447491 769 ntBASIC4.35□□□□□ -1.71
C11orf88Q6PI97 USP9YP32-201ENST00000452432 430 ntBASIC4.35□□□□□ -1.71
C11orf88Q6PI97 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.35□□□□□ -1.71
C11orf88Q6PI97 AL356981.1-201ENST00000454879 684 ntBASIC4.35□□□□□ -1.71
C11orf88Q6PI97 RPS15AP1-201ENST00000457423 391 ntBASIC4.35□□□□□ -1.71
C11orf88Q6PI97 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.35□□□□□ -1.71
C11orf88Q6PI97 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
C11orf88Q6PI97 OR5M14P-201ENST00000506803 618 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms