Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.69□□□□□ -1.18
RC3H1Q5TC82 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RC3H1Q5TC82 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RC3H1Q5TC82 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RC3H1Q5TC82 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC7.69□□□□□ -1.18
RC3H1Q5TC82 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.69□□□□□ -1.18
RC3H1Q5TC82 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.69□□□□□ -1.18
RC3H1Q5TC82 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.69□□□□□ -1.18
RC3H1Q5TC82 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC7.69□□□□□ -1.18
RC3H1Q5TC82 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.69□□□□□ -1.18
RC3H1Q5TC82 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RC3H1Q5TC82 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC7.69□□□□□ -1.18
RC3H1Q5TC82 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RC3H1Q5TC82 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RC3H1Q5TC82 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RC3H1Q5TC82 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RC3H1Q5TC82 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RC3H1Q5TC82 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
RC3H1Q5TC82 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
RC3H1Q5TC82 RNU6-505P-201ENST00000384427 107 ntBASIC7.68□□□□□ -1.18
RC3H1Q5TC82 MIR568-201ENST00000385036 95 ntBASIC7.68□□□□□ -1.18
RC3H1Q5TC82 AL356967.1-201ENST00000406305 431 ntBASIC7.68□□□□□ -1.18
RC3H1Q5TC82 CBX3P6-201ENST00000430257 527 ntBASIC7.68□□□□□ -1.18
RC3H1Q5TC82 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC7.68□□□□□ -1.18
RC3H1Q5TC82 CECR9-201ENST00000453421 199 ntBASIC7.68□□□□□ -1.18
RC3H1Q5TC82 AC108078.3-201ENST00000502633 489 ntBASIC7.68□□□□□ -1.18
RC3H1Q5TC82 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC7.68□□□□□ -1.18
RC3H1Q5TC82 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC7.68□□□□□ -1.18
RC3H1Q5TC82 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC7.68□□□□□ -1.18
RC3H1Q5TC82 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC7.68□□□□□ -1.18
RC3H1Q5TC82 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.68□□□□□ -1.18
RC3H1Q5TC82 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC7.68□□□□□ -1.18
RC3H1Q5TC82 MIR3189-201ENST00000578735 73 ntBASIC7.68□□□□□ -1.18
RC3H1Q5TC82 AC020916.2-201ENST00000591242 360 ntBASIC7.68□□□□□ -1.18
RC3H1Q5TC82 HMGB1P24-202ENST00000615653 685 ntBASIC7.68□□□□□ -1.18
RC3H1Q5TC82 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC7.68□□□□□ -1.18
RC3H1Q5TC82 CU639417.4-201ENST00000623928 207 ntBASIC7.68□□□□□ -1.18
RC3H1Q5TC82 AC024023.1-201ENST00000624530 922 ntBASIC7.68□□□□□ -1.18
RC3H1Q5TC82 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RC3H1Q5TC82 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
RC3H1Q5TC82 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RC3H1Q5TC82 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.68□□□□□ -1.18
RC3H1Q5TC82 AC010928.1-201ENST00000592477 1447 ntBASIC7.68□□□□□ -1.18
RC3H1Q5TC82 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RC3H1Q5TC82 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
RC3H1Q5TC82 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
RC3H1Q5TC82 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RC3H1Q5TC82 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC7.68□□□□□ -1.18
RC3H1Q5TC82 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 NSRP1P1-201ENST00000444067 1693 ntBASIC7.67□□□□□ -1.18
RC3H1Q5TC82 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 RNU6-543P-201ENST00000362576 108 ntBASIC7.67□□□□□ -1.18
RC3H1Q5TC82 RN7SKP59-201ENST00000410520 314 ntBASIC7.67□□□□□ -1.18
RC3H1Q5TC82 AL359704.1-201ENST00000411586 781 ntBASIC7.67□□□□□ -1.18
RC3H1Q5TC82 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 AL662874.1-201ENST00000426065 230 ntBASIC7.67□□□□□ -1.18
RC3H1Q5TC82 BLOC1S2P1-201ENST00000428431 301 ntBASIC7.67□□□□□ -1.18
RC3H1Q5TC82 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 AC126120.1-201ENST00000431082 470 ntBASIC7.67□□□□□ -1.18
RC3H1Q5TC82 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 AL672138.1-201ENST00000450604 1015 ntBASIC7.67□□□□□ -1.18
RC3H1Q5TC82 RANP1-206ENST00000455094 651 ntBASIC7.67□□□□□ -1.18
RC3H1Q5TC82 AC073594.1-201ENST00000462065 364 ntBASIC7.67□□□□□ -1.18
RC3H1Q5TC82 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 Y_RNA.720-201ENST00000517166 92 ntBASIC7.67□□□□□ -1.18
RC3H1Q5TC82 CDC42P3-201ENST00000518493 633 ntBASIC7.67□□□□□ -1.18
RC3H1Q5TC82 CASC19-203ENST00000523510 575 ntTSL 3 BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 XIAPP1-201ENST00000603162 600 ntBASIC7.67□□□□□ -1.18
RC3H1Q5TC82 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 PRELID3BP8-201ENST00000604148 295 ntBASIC7.67□□□□□ -1.18
RC3H1Q5TC82 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 AL450226.2-201ENST00000622913 439 ntBASIC7.67□□□□□ -1.18
RC3H1Q5TC82 PISRT1-201ENST00000626175 531 ntBASIC7.67□□□□□ -1.18
RC3H1Q5TC82 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC7.67□□□□□ -1.18
RC3H1Q5TC82 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms