Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.92□□□□□ -1.62
RFX7Q2KHR2 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.92□□□□□ -1.62
RFX7Q2KHR2 AC244517.3-201ENST00000616254 1235 ntBASIC4.92□□□□□ -1.62
RFX7Q2KHR2 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.92□□□□□ -1.62
RFX7Q2KHR2 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RFX7Q2KHR2 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
RFX7Q2KHR2 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RFX7Q2KHR2 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RFX7Q2KHR2 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.92□□□□□ -1.62
RFX7Q2KHR2 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
RFX7Q2KHR2 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
RFX7Q2KHR2 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
RFX7Q2KHR2 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RFX7Q2KHR2 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
RFX7Q2KHR2 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.92□□□□□ -1.62
RFX7Q2KHR2 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RFX7Q2KHR2 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RFX7Q2KHR2 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
RFX7Q2KHR2 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RFX7Q2KHR2 MIR93-201ENST00000385024 80 ntBASIC4.91□□□□□ -1.62
RFX7Q2KHR2 HSPE1P12-201ENST00000412576 301 ntBASIC4.91□□□□□ -1.62
RFX7Q2KHR2 TRGV7-201ENST00000427089 353 ntBASIC4.91□□□□□ -1.62
RFX7Q2KHR2 TBCAP1-201ENST00000436520 327 ntBASIC4.91□□□□□ -1.62
RFX7Q2KHR2 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.91□□□□□ -1.62
RFX7Q2KHR2 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.91□□□□□ -1.62
RFX7Q2KHR2 RPL7L1P1-201ENST00000448259 785 ntBASIC4.91□□□□□ -1.62
RFX7Q2KHR2 RN7SL271P-201ENST00000487601 295 ntBASIC4.91□□□□□ -1.62
RFX7Q2KHR2 NPM1P41-201ENST00000512920 831 ntBASIC4.91□□□□□ -1.62
RFX7Q2KHR2 RNU1-45P-201ENST00000517191 141 ntBASIC4.91□□□□□ -1.62
RFX7Q2KHR2 IGKV2-38-201ENST00000517443 247 ntBASIC4.91□□□□□ -1.62
RFX7Q2KHR2 MYL12AP1-201ENST00000518490 515 ntBASIC4.91□□□□□ -1.62
RFX7Q2KHR2 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.91□□□□□ -1.62
RFX7Q2KHR2 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.91□□□□□ -1.62
RFX7Q2KHR2 AC053481.3-201ENST00000577881 843 ntBASIC4.91□□□□□ -1.62
RFX7Q2KHR2 MIR4444-1-201ENST00000581696 74 ntBASIC4.91□□□□□ -1.62
RFX7Q2KHR2 MIR3158-1-201ENST00000583596 81 ntBASIC4.91□□□□□ -1.62
RFX7Q2KHR2 MIR4444-2-201ENST00000584390 74 ntBASIC4.91□□□□□ -1.62
RFX7Q2KHR2 AL451086.1-201ENST00000605596 223 ntBASIC4.91□□□□□ -1.62
RFX7Q2KHR2 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.91□□□□□ -1.62
RFX7Q2KHR2 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.91□□□□□ -1.62
RFX7Q2KHR2 MIR6500-201ENST00000622700 86 ntBASIC4.91□□□□□ -1.62
RFX7Q2KHR2 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.91□□□□□ -1.62
RFX7Q2KHR2 CDC27P2-201ENST00000425026 1922 ntBASIC4.91□□□□□ -1.62
RFX7Q2KHR2 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RFX7Q2KHR2 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.91□□□□□ -1.62
RFX7Q2KHR2 AC027290.2-201ENST00000623210 18662 ntBASIC4.91□□□□□ -1.62
RFX7Q2KHR2 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RFX7Q2KHR2 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
RFX7Q2KHR2 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RFX7Q2KHR2 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.91□□□□□ -1.62
RFX7Q2KHR2 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RFX7Q2KHR2 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RFX7Q2KHR2 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RFX7Q2KHR2 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RFX7Q2KHR2 HMGB3P19-201ENST00000403971 560 ntBASIC4.91□□□□□ -1.62
RFX7Q2KHR2 RNU4-6P-201ENST00000410804 122 ntBASIC4.91□□□□□ -1.62
RFX7Q2KHR2 AC011742.1-201ENST00000431448 434 ntBASIC4.91□□□□□ -1.62
RFX7Q2KHR2 AC083863.1-201ENST00000438811 231 ntBASIC4.91□□□□□ -1.62
RFX7Q2KHR2 RPS4XP4-201ENST00000443195 763 ntBASIC4.91□□□□□ -1.62
RFX7Q2KHR2 AC073587.1-201ENST00000447093 876 ntBASIC4.91□□□□□ -1.62
RFX7Q2KHR2 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.91□□□□□ -1.62
RFX7Q2KHR2 RN7SL132P-201ENST00000478131 296 ntBASIC4.91□□□□□ -1.62
RFX7Q2KHR2 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.91□□□□□ -1.62
RFX7Q2KHR2 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.91□□□□□ -1.62
RFX7Q2KHR2 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.91□□□□□ -1.62
RFX7Q2KHR2 RPL23AP87-202ENST00000573039 466 ntBASIC4.91□□□□□ -1.62
RFX7Q2KHR2 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.91□□□□□ -1.62
RFX7Q2KHR2 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.91□□□□□ -1.62
RFX7Q2KHR2 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.9□□□□□ -1.62
RFX7Q2KHR2 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.9□□□□□ -1.62
RFX7Q2KHR2 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RFX7Q2KHR2 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
RFX7Q2KHR2 RNA5SP124-201ENST00000362739 110 ntBASIC4.9□□□□□ -1.63
RFX7Q2KHR2 SNORA62.3-201ENST00000365110 153 ntBASIC4.9□□□□□ -1.63
RFX7Q2KHR2 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.9□□□□□ -1.63
RFX7Q2KHR2 AL691449.1-201ENST00000426570 421 ntBASIC4.9□□□□□ -1.63
RFX7Q2KHR2 MTCO1P54-201ENST00000430139 712 ntBASIC4.9□□□□□ -1.63
RFX7Q2KHR2 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.9□□□□□ -1.63
RFX7Q2KHR2 RNA5SP143-201ENST00000516936 115 ntBASIC4.9□□□□□ -1.63
RFX7Q2KHR2 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.9□□□□□ -1.63
RFX7Q2KHR2 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.9□□□□□ -1.63
RFX7Q2KHR2 RNU6-84P-201ENST00000607737 102 ntBASIC4.9□□□□□ -1.63
RFX7Q2KHR2 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RFX7Q2KHR2 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RFX7Q2KHR2 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RFX7Q2KHR2 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RFX7Q2KHR2 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RFX7Q2KHR2 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.89□□□□□ -1.63
RFX7Q2KHR2 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
RFX7Q2KHR2 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.89□□□□□ -1.63
RFX7Q2KHR2 MIR554-201ENST00000384874 96 ntBASIC4.89□□□□□ -1.63
RFX7Q2KHR2 TRAV35-201ENST00000390462 330 ntBASIC4.89□□□□□ -1.63
RFX7Q2KHR2 RN7SKP202-201ENST00000410439 330 ntBASIC4.89□□□□□ -1.63
RFX7Q2KHR2 RN7SKP159-201ENST00000410657 292 ntBASIC4.89□□□□□ -1.63
RFX7Q2KHR2 RNA5SP104-201ENST00000410989 118 ntBASIC4.89□□□□□ -1.63
RFX7Q2KHR2 ARL4AP4-201ENST00000434170 518 ntBASIC4.89□□□□□ -1.63
RFX7Q2KHR2 ELOCP18-201ENST00000434209 337 ntBASIC4.89□□□□□ -1.63
RFX7Q2KHR2 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.89□□□□□ -1.63
RFX7Q2KHR2 AL353748.1-201ENST00000440753 474 ntBASIC4.89□□□□□ -1.63
RFX7Q2KHR2 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms