Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.35□□□□□ -1.71
SIX1Q15475 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.35□□□□□ -1.71
SIX1Q15475 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.35□□□□□ -1.71
SIX1Q15475 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.35□□□□□ -1.71
SIX1Q15475 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.35□□□□□ -1.71
SIX1Q15475 RPL12P25-202ENST00000598100 674 ntBASIC4.35□□□□□ -1.71
SIX1Q15475 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SIX1Q15475 AF230666.2-201ENST00000602328 725 ntBASIC4.35□□□□□ -1.71
SIX1Q15475 AC242628.1-201ENST00000606810 391 ntBASIC4.35□□□□□ -1.71
SIX1Q15475 AC005021.1-201ENST00000608730 355 ntBASIC4.35□□□□□ -1.71
SIX1Q15475 AC084824.5-201ENST00000612009 413 ntBASIC4.35□□□□□ -1.71
SIX1Q15475 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SIX1Q15475 MIR4727-201ENST00000622232 55 ntBASIC4.35□□□□□ -1.71
SIX1Q15475 AL391262.2-201ENST00000622466 494 ntBASIC4.35□□□□□ -1.71
SIX1Q15475 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.35□□□□□ -1.71
SIX1Q15475 AC140479.6-201ENST00000633535 357 ntBASIC4.35□□□□□ -1.71
SIX1Q15475 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.35□□□□□ -1.71
SIX1Q15475 MARK2P15-201ENST00000432204 2186 ntBASIC4.35□□□□□ -1.71
SIX1Q15475 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.35□□□□□ -1.71
SIX1Q15475 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.35□□□□□ -1.71
SIX1Q15475 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SIX1Q15475 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SIX1Q15475 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
SIX1Q15475 AC090017.1-201ENST00000548612 1779 ntBASIC4.35□□□□□ -1.71
SIX1Q15475 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SIX1Q15475 AC018555.1-201ENST00000567548 1980 ntBASIC4.34□□□□□ -1.71
SIX1Q15475 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SIX1Q15475 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SIX1Q15475 AC136624.1-201ENST00000400791 413 ntBASIC4.34□□□□□ -1.71
SIX1Q15475 SNORA3C-201ENST00000408792 125 ntBASIC4.34□□□□□ -1.71
SIX1Q15475 JKAMPP1-201ENST00000413804 919 ntBASIC4.34□□□□□ -1.71
SIX1Q15475 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.34□□□□□ -1.71
SIX1Q15475 ARL2BPP10-201ENST00000446487 531 ntBASIC4.34□□□□□ -1.71
SIX1Q15475 AL627224.1-201ENST00000448334 444 ntBASIC4.34□□□□□ -1.71
SIX1Q15475 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.34□□□□□ -1.71
SIX1Q15475 AC239798.3-201ENST00000454459 408 ntBASIC4.34□□□□□ -1.71
SIX1Q15475 RN7SL98P-201ENST00000462271 300 ntBASIC4.34□□□□□ -1.71
SIX1Q15475 RN7SL481P-201ENST00000477764 299 ntBASIC4.34□□□□□ -1.71
SIX1Q15475 RPL23AP72-201ENST00000492447 435 ntBASIC4.34□□□□□ -1.71
SIX1Q15475 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC4.34□□□□□ -1.71
SIX1Q15475 OR9N1P-202ENST00000494289 481 ntBASIC4.34□□□□□ -1.71
SIX1Q15475 RPL31P61-201ENST00000496160 376 ntBASIC4.34□□□□□ -1.71
SIX1Q15475 HMGB1P3-201ENST00000502802 616 ntBASIC4.34□□□□□ -1.71
SIX1Q15475 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.34□□□□□ -1.71
SIX1Q15475 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.34□□□□□ -1.71
SIX1Q15475 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.34□□□□□ -1.71
SIX1Q15475 AC093824.1-201ENST00000508796 343 ntBASIC4.34□□□□□ -1.71
SIX1Q15475 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.34□□□□□ -1.71
SIX1Q15475 RAB9BP1-201ENST00000519581 626 ntBASIC4.34□□□□□ -1.71
SIX1Q15475 HMGB1P46-201ENST00000520062 610 ntBASIC4.34□□□□□ -1.71
SIX1Q15475 MTND1P6-201ENST00000523621 946 ntBASIC4.34□□□□□ -1.71
SIX1Q15475 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.34□□□□□ -1.71
SIX1Q15475 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.34□□□□□ -1.71
SIX1Q15475 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.34□□□□□ -1.71
SIX1Q15475 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SIX1Q15475 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.34□□□□□ -1.71
SIX1Q15475 BMS1P7-201ENST00000602440 1052 ntBASIC4.34□□□□□ -1.71
SIX1Q15475 AL445493.3-201ENST00000619568 477 ntBASIC4.34□□□□□ -1.71
SIX1Q15475 AP000346.3-201ENST00000622821 210 ntBASIC4.34□□□□□ -1.71
SIX1Q15475 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.34□□□□□ -1.71
SIX1Q15475 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.34□□□□□ -1.71
SIX1Q15475 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
SIX1Q15475 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.34□□□□□ -1.71
SIX1Q15475 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.34□□□□□ -1.71
SIX1Q15475 MTCO1P15-201ENST00000529569 1526 ntBASIC4.34□□□□□ -1.71
SIX1Q15475 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.34□□□□□ -1.71
SIX1Q15475 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SIX1Q15475 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.33□□□□□ -1.72
SIX1Q15475 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.33□□□□□ -1.72
SIX1Q15475 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.33□□□□□ -1.72
SIX1Q15475 IQCB2P-201ENST00000401788 1633 ntBASIC4.33□□□□□ -1.72
SIX1Q15475 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.33□□□□□ -1.72
SIX1Q15475 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SIX1Q15475 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SIX1Q15475 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
SIX1Q15475 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SIX1Q15475 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SIX1Q15475 RNU1-14P-201ENST00000362759 152 ntBASIC4.33□□□□□ -1.72
SIX1Q15475 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SIX1Q15475 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SIX1Q15475 MIR141-201ENST00000384975 95 ntBASIC4.33□□□□□ -1.72
SIX1Q15475 Z86062.1-201ENST00000406773 777 ntBASIC4.33□□□□□ -1.72
SIX1Q15475 RNA5SP36-201ENST00000410197 133 ntBASIC4.33□□□□□ -1.72
SIX1Q15475 DNAJC19P7-201ENST00000428811 344 ntBASIC4.33□□□□□ -1.72
SIX1Q15475 UBE2V1P6-201ENST00000430840 422 ntBASIC4.33□□□□□ -1.72
SIX1Q15475 AL513321.1-201ENST00000441175 761 ntBASIC4.33□□□□□ -1.72
SIX1Q15475 TPTE2P3-201ENST00000441562 1189 ntBASIC4.33□□□□□ -1.72
SIX1Q15475 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.33□□□□□ -1.72
SIX1Q15475 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.33□□□□□ -1.72
SIX1Q15475 AC009220.1-201ENST00000451614 275 ntBASIC4.33□□□□□ -1.72
SIX1Q15475 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.33□□□□□ -1.72
SIX1Q15475 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.33□□□□□ -1.72
SIX1Q15475 RN7SL860P-201ENST00000473738 223 ntBASIC4.33□□□□□ -1.72
SIX1Q15475 AC098583.1-201ENST00000480875 255 ntBASIC4.33□□□□□ -1.72
SIX1Q15475 LARP7P4-201ENST00000481075 878 ntBASIC4.33□□□□□ -1.72
SIX1Q15475 MTCO1P31-201ENST00000506355 492 ntBASIC4.33□□□□□ -1.72
SIX1Q15475 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.33□□□□□ -1.72
SIX1Q15475 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.33□□□□□ -1.72
SIX1Q15475 RN7SKP34-201ENST00000516142 244 ntBASIC4.33□□□□□ -1.72
SIX1Q15475 IGKV2-38-201ENST00000517443 247 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 147.6 ms