Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC6.32□□□□□ -1.4
SOX4Q06945 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC6.32□□□□□ -1.4
SOX4Q06945 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SOX4Q06945 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.32□□□□□ -1.4
SOX4Q06945 AL512360.1-201ENST00000555346 234 ntBASIC6.32□□□□□ -1.4
SOX4Q06945 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC6.32□□□□□ -1.4
SOX4Q06945 AC025678.1-201ENST00000567861 338 ntBASIC6.32□□□□□ -1.4
SOX4Q06945 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
SOX4Q06945 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.32□□□□□ -1.4
SOX4Q06945 AC011445.2-201ENST00000599274 173 ntBASIC6.32□□□□□ -1.4
SOX4Q06945 AP001429.1-201ENST00000602568 530 ntBASIC6.32□□□□□ -1.4
SOX4Q06945 SUGT1P3-202ENST00000604259 383 ntBASIC6.32□□□□□ -1.4
SOX4Q06945 Z98200.1-201ENST00000607298 470 ntBASIC6.32□□□□□ -1.4
SOX4Q06945 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SOX4Q06945 AC006065.6-201ENST00000625201 545 ntBASIC6.32□□□□□ -1.4
SOX4Q06945 MIR193BHG-214ENST00000641765 509 ntBASIC6.32□□□□□ -1.4
SOX4Q06945 SAMMSON-227ENST00000642114 1199 ntBASIC6.32□□□□□ -1.4
SOX4Q06945 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.32□□□□□ -1.4
SOX4Q06945 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SOX4Q06945 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
SOX4Q06945 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SOX4Q06945 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.32□□□□□ -1.4
SOX4Q06945 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.32□□□□□ -1.4
SOX4Q06945 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.32□□□□□ -1.4
SOX4Q06945 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.32□□□□□ -1.4
SOX4Q06945 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.32□□□□□ -1.4
SOX4Q06945 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SOX4Q06945 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SOX4Q06945 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.31□□□□□ -1.4
SOX4Q06945 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
SOX4Q06945 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.31□□□□□ -1.4
SOX4Q06945 ZNF37BP-203ENST00000452306 1352 ntBASIC6.31□□□□□ -1.4
SOX4Q06945 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SOX4Q06945 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.31□□□□□ -1.4
SOX4Q06945 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SOX4Q06945 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SOX4Q06945 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SOX4Q06945 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SOX4Q06945 AL355377.1-201ENST00000621125 1653 ntBASIC6.31□□□□□ -1.4
SOX4Q06945 CDR1-202ENST00000625883 1485 ntBASIC6.31□□□□□ -1.4
SOX4Q06945 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.31□□□□□ -1.4
SOX4Q06945 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SOX4Q06945 Y_RNA.97-201ENST00000363094 102 ntBASIC6.31□□□□□ -1.4
SOX4Q06945 RNU6-1066P-201ENST00000363573 105 ntBASIC6.31□□□□□ -1.4
SOX4Q06945 RNA5SP394-201ENST00000364216 119 ntBASIC6.31□□□□□ -1.4
SOX4Q06945 RNU6-619P-201ENST00000365146 108 ntBASIC6.31□□□□□ -1.4
SOX4Q06945 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SOX4Q06945 HMGB1P20-201ENST00000402555 677 ntBASIC6.31□□□□□ -1.4
SOX4Q06945 AMD1P2-201ENST00000412936 992 ntBASIC6.31□□□□□ -1.4
SOX4Q06945 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.31□□□□□ -1.4
SOX4Q06945 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SOX4Q06945 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
SOX4Q06945 GAPDHP48-201ENST00000436626 961 ntBASIC6.31□□□□□ -1.4
SOX4Q06945 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC6.31□□□□□ -1.4
SOX4Q06945 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC6.31□□□□□ -1.4
SOX4Q06945 AC023141.9-201ENST00000458734 412 ntBASIC6.31□□□□□ -1.4
SOX4Q06945 RPL38P1-201ENST00000460914 211 ntBASIC6.31□□□□□ -1.4
SOX4Q06945 AC010307.1-201ENST00000467206 836 ntBASIC6.31□□□□□ -1.4
SOX4Q06945 AC087312.1-201ENST00000471411 480 ntBASIC6.31□□□□□ -1.4
SOX4Q06945 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.31□□□□□ -1.4
SOX4Q06945 AC114981.1-201ENST00000503897 678 ntBASIC6.31□□□□□ -1.4
SOX4Q06945 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC6.31□□□□□ -1.4
SOX4Q06945 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.31□□□□□ -1.4
SOX4Q06945 RN7SKP288-201ENST00000516227 268 ntBASIC6.31□□□□□ -1.4
SOX4Q06945 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC6.31□□□□□ -1.4
SOX4Q06945 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC6.31□□□□□ -1.4
SOX4Q06945 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC6.31□□□□□ -1.4
SOX4Q06945 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.31□□□□□ -1.4
SOX4Q06945 AC112191.2-201ENST00000522428 333 ntBASIC6.31□□□□□ -1.4
SOX4Q06945 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC6.31□□□□□ -1.4
SOX4Q06945 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.31□□□□□ -1.4
SOX4Q06945 AC022878.1-201ENST00000530684 149 ntBASIC6.31□□□□□ -1.4
SOX4Q06945 OR5AN2P-201ENST00000534535 896 ntBASIC6.31□□□□□ -1.4
SOX4Q06945 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.31□□□□□ -1.4
SOX4Q06945 AL359212.1-201ENST00000556608 614 ntBASIC6.31□□□□□ -1.4
SOX4Q06945 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.31□□□□□ -1.4
SOX4Q06945 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.31□□□□□ -1.4
SOX4Q06945 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
SOX4Q06945 AL136295.6-201ENST00000610486 658 ntBASIC6.31□□□□□ -1.4
SOX4Q06945 AL139099.4-201ENST00000614802 114 ntBASIC6.31□□□□□ -1.4
SOX4Q06945 ATE1-AS1-202ENST00000636460 506 ntBASIC6.31□□□□□ -1.4
SOX4Q06945 MKKS-204ENST00000639674 192 ntBASIC6.31□□□□□ -1.4
SOX4Q06945 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SOX4Q06945 OFD1P17-201ENST00000437639 3018 ntBASIC6.31□□□□□ -1.4
SOX4Q06945 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
SOX4Q06945 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.31□□□□□ -1.4
SOX4Q06945 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SOX4Q06945 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
SOX4Q06945 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
SOX4Q06945 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SOX4Q06945 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.31□□□□□ -1.4
SOX4Q06945 THAP12P9-201ENST00000503971 2360 ntBASIC6.31□□□□□ -1.4
SOX4Q06945 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SOX4Q06945 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
SOX4Q06945 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SOX4Q06945 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SOX4Q06945 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.31□□□□□ -1.4
SOX4Q06945 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.31□□□□□ -1.4
SOX4Q06945 AL033543.1-201ENST00000623440 13454 ntBASIC6.3□□□□□ -1.4
SOX4Q06945 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms