Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC022431.1-201ENST00000450941 438 ntBASIC4.82□□□□□ -1.64
RAE1P78406 AC092647.2-201ENST00000452998 253 ntBASIC4.82□□□□□ -1.64
RAE1P78406 AL356981.1-201ENST00000454879 684 ntBASIC4.82□□□□□ -1.64
RAE1P78406 TPTE2P5-203ENST00000458118 728 ntBASIC4.82□□□□□ -1.64
RAE1P78406 RPS17P2-201ENST00000461663 408 ntBASIC4.82□□□□□ -1.64
RAE1P78406 RPL7P18-201ENST00000478965 734 ntBASIC4.82□□□□□ -1.64
RAE1P78406 RPL7P39-201ENST00000481157 744 ntBASIC4.82□□□□□ -1.64
RAE1P78406 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.82□□□□□ -1.64
RAE1P78406 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.82□□□□□ -1.64
RAE1P78406 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
RAE1P78406 AC111000.2-201ENST00000507775 550 ntBASIC4.82□□□□□ -1.64
RAE1P78406 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RAE1P78406 XKRY-201ENST00000510392 1100 ntBASIC4.82□□□□□ -1.64
RAE1P78406 AC010587.2-201ENST00000511727 448 ntBASIC4.82□□□□□ -1.64
RAE1P78406 ATP5LP3-201ENST00000514223 304 ntBASIC4.82□□□□□ -1.64
RAE1P78406 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.82□□□□□ -1.64
RAE1P78406 AC008562.1-201ENST00000521763 330 ntBASIC4.82□□□□□ -1.64
RAE1P78406 COX6B1P6-201ENST00000522347 255 ntBASIC4.82□□□□□ -1.64
RAE1P78406 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RAE1P78406 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.82□□□□□ -1.64
RAE1P78406 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RAE1P78406 HIGD1AP17-201ENST00000554576 276 ntBASIC4.82□□□□□ -1.64
RAE1P78406 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.82□□□□□ -1.64
RAE1P78406 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.82□□□□□ -1.64
RAE1P78406 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.82□□□□□ -1.64
RAE1P78406 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.82□□□□□ -1.64
RAE1P78406 AP005136.1-201ENST00000579765 429 ntBASIC4.82□□□□□ -1.64
RAE1P78406 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.82□□□□□ -1.64
RAE1P78406 VN1R84P-201ENST00000593697 235 ntBASIC4.82□□□□□ -1.64
RAE1P78406 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.82□□□□□ -1.64
RAE1P78406 DUXAP11-201ENST00000603858 526 ntBASIC4.82□□□□□ -1.64
RAE1P78406 AC122108.2-201ENST00000611946 526 ntBASIC4.82□□□□□ -1.64
RAE1P78406 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.82□□□□□ -1.64
RAE1P78406 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.82□□□□□ -1.64
RAE1P78406 AC068620.4-201ENST00000636730 1182 ntBASIC4.82□□□□□ -1.64
RAE1P78406 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.82□□□□□ -1.64
RAE1P78406 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
RAE1P78406 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.82□□□□□ -1.64
RAE1P78406 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RAE1P78406 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RAE1P78406 AL731532.2-201ENST00000623542 1953 ntBASIC4.82□□□□□ -1.64
RAE1P78406 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RAE1P78406 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RAE1P78406 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RAE1P78406 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.81□□□□□ -1.64
RAE1P78406 Z99496.1-201ENST00000469424 1477 ntBASIC4.81□□□□□ -1.64
RAE1P78406 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RAE1P78406 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
RAE1P78406 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
RAE1P78406 HSPA8P17-201ENST00000427029 1382 ntBASIC4.81□□□□□ -1.64
RAE1P78406 AC005005.4-201ENST00000623789 16698 ntBASIC4.81□□□□□ -1.64
RAE1P78406 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RAE1P78406 DCAF13P3-201ENST00000561147 1334 ntBASIC4.81□□□□□ -1.64
RAE1P78406 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RAE1P78406 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
RAE1P78406 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RAE1P78406 SNORD116-9-201ENST00000384000 95 ntBASIC4.81□□□□□ -1.64
RAE1P78406 SNORD116-3-201ENST00000384287 95 ntBASIC4.81□□□□□ -1.64
RAE1P78406 SNORD116-7-201ENST00000384404 95 ntBASIC4.81□□□□□ -1.64
RAE1P78406 SNORD116-5-201ENST00000384462 95 ntBASIC4.81□□□□□ -1.64
RAE1P78406 TMSB4XP8-201ENST00000402089 135 ntBASIC4.81□□□□□ -1.64
RAE1P78406 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.81□□□□□ -1.64
RAE1P78406 GSTA8P-201ENST00000404253 637 ntBASIC4.81□□□□□ -1.64
RAE1P78406 AL391361.1-201ENST00000405580 489 ntBASIC4.81□□□□□ -1.64
RAE1P78406 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RAE1P78406 RN7SKP206-201ENST00000410823 293 ntBASIC4.81□□□□□ -1.64
RAE1P78406 RN7SKP126-201ENST00000411143 300 ntBASIC4.81□□□□□ -1.64
RAE1P78406 SETP15-201ENST00000412724 337 ntBASIC4.81□□□□□ -1.64
RAE1P78406 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.81□□□□□ -1.64
RAE1P78406 TMSB4XP6-201ENST00000415187 135 ntBASIC4.81□□□□□ -1.64
RAE1P78406 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.81□□□□□ -1.64
RAE1P78406 AC013429.2-201ENST00000418798 781 ntBASIC4.81□□□□□ -1.64
RAE1P78406 TMSB4XP1-201ENST00000424567 135 ntBASIC4.81□□□□□ -1.64
RAE1P78406 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.81□□□□□ -1.64
RAE1P78406 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.81□□□□□ -1.64
RAE1P78406 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.81□□□□□ -1.64
RAE1P78406 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.81□□□□□ -1.64
RAE1P78406 EEF1B2P5-201ENST00000444820 548 ntBASIC4.81□□□□□ -1.64
RAE1P78406 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.81□□□□□ -1.64
RAE1P78406 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.81□□□□□ -1.64
RAE1P78406 AL691482.1-201ENST00000453255 87 ntBASIC4.81□□□□□ -1.64
RAE1P78406 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.81□□□□□ -1.64
RAE1P78406 AC005229.2-201ENST00000456995 399 ntBASIC4.81□□□□□ -1.64
RAE1P78406 MTND2P28-201ENST00000457540 1044 ntBASIC4.81□□□□□ -1.64
RAE1P78406 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.81□□□□□ -1.64
RAE1P78406 RPL31P3-201ENST00000458430 332 ntBASIC4.81□□□□□ -1.64
RAE1P78406 COPS8P2-201ENST00000473228 627 ntBASIC4.81□□□□□ -1.64
RAE1P78406 BZW1P2-201ENST00000473537 826 ntBASIC4.81□□□□□ -1.64
RAE1P78406 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.81□□□□□ -1.64
RAE1P78406 AC073073.1-201ENST00000493920 463 ntBASIC4.81□□□□□ -1.64
RAE1P78406 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RAE1P78406 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.81□□□□□ -1.64
RAE1P78406 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.81□□□□□ -1.64
RAE1P78406 AC021146.8-201ENST00000507455 733 ntBASIC4.81□□□□□ -1.64
RAE1P78406 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.81□□□□□ -1.64
RAE1P78406 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RAE1P78406 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.81□□□□□ -1.64
RAE1P78406 SNORA70.11-201ENST00000515987 138 ntBASIC4.81□□□□□ -1.64
RAE1P78406 SNORA70.13-201ENST00000516116 138 ntBASIC4.81□□□□□ -1.64
RAE1P78406 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms