Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.55□□□□□ -1.68
TPM4P67936 AC105233.3-201ENST00000531125 744 ntBASIC4.55□□□□□ -1.68
TPM4P67936 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.55□□□□□ -1.68
TPM4P67936 AC009101.1-201ENST00000568135 242 ntBASIC4.55□□□□□ -1.68
TPM4P67936 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.55□□□□□ -1.68
TPM4P67936 EIF1P6-201ENST00000600054 334 ntBASIC4.55□□□□□ -1.68
TPM4P67936 AC010200.2-201ENST00000605098 235 ntBASIC4.55□□□□□ -1.68
TPM4P67936 AC090510.2-201ENST00000617465 629 ntBASIC4.55□□□□□ -1.68
TPM4P67936 AL645927.2-201ENST00000618350 349 ntBASIC4.55□□□□□ -1.68
TPM4P67936 AP003072.5-201ENST00000623872 773 ntBASIC4.55□□□□□ -1.68
TPM4P67936 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TPM4P67936 AC025031.4-201ENST00000621248 3271 ntBASIC4.55□□□□□ -1.68
TPM4P67936 EIF2AP4-201ENST00000424793 1781 ntBASIC4.55□□□□□ -1.68
TPM4P67936 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
TPM4P67936 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TPM4P67936 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.54□□□□□ -1.68
TPM4P67936 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.54□□□□□ -1.68
TPM4P67936 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TPM4P67936 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TPM4P67936 RPS4XP5-202ENST00000449995 1334 ntBASIC4.54□□□□□ -1.68
TPM4P67936 AC233968.1-201ENST00000611212 1300 ntBASIC4.54□□□□□ -1.68
TPM4P67936 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
TPM4P67936 RNU6-1279P-201ENST00000383917 103 ntBASIC4.54□□□□□ -1.68
TPM4P67936 Z98941.1-201ENST00000407764 100 ntBASIC4.54□□□□□ -1.68
TPM4P67936 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.54□□□□□ -1.68
TPM4P67936 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.54□□□□□ -1.68
TPM4P67936 EXTL2P1-201ENST00000446218 416 ntBASIC4.54□□□□□ -1.68
TPM4P67936 AL500522.2-201ENST00000448562 343 ntBASIC4.54□□□□□ -1.68
TPM4P67936 FABP3P2-201ENST00000453169 399 ntBASIC4.54□□□□□ -1.68
TPM4P67936 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.54□□□□□ -1.68
TPM4P67936 RPL35P6-201ENST00000490024 372 ntBASIC4.54□□□□□ -1.68
TPM4P67936 RN7SL810P-201ENST00000493031 276 ntBASIC4.54□□□□□ -1.68
TPM4P67936 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.54□□□□□ -1.68
TPM4P67936 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.54□□□□□ -1.68
TPM4P67936 RNA5SP519-201ENST00000516480 119 ntBASIC4.54□□□□□ -1.68
TPM4P67936 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TPM4P67936 AC135001.1-201ENST00000544546 283 ntBASIC4.54□□□□□ -1.68
TPM4P67936 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.54□□□□□ -1.68
TPM4P67936 AC022655.2-201ENST00000577280 318 ntBASIC4.54□□□□□ -1.68
TPM4P67936 MIR4644-201ENST00000579929 84 ntBASIC4.54□□□□□ -1.68
TPM4P67936 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.54□□□□□ -1.68
TPM4P67936 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.54□□□□□ -1.68
TPM4P67936 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.54□□□□□ -1.68
TPM4P67936 AC004825.2-201ENST00000616634 455 ntBASIC4.54□□□□□ -1.68
TPM4P67936 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.54□□□□□ -1.68
TPM4P67936 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.54□□□□□ -1.68
TPM4P67936 MIR6715B-201ENST00000637172 77 ntBASIC4.54□□□□□ -1.68
TPM4P67936 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TPM4P67936 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TPM4P67936 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.53□□□□□ -1.68
TPM4P67936 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TPM4P67936 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TPM4P67936 CIR1P2-201ENST00000514821 1342 ntBASIC4.53□□□□□ -1.68
TPM4P67936 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TPM4P67936 AC114546.3-201ENST00000623582 1734 ntBASIC4.53□□□□□ -1.68
TPM4P67936 OR11H4-201ENST00000315409 1082 ntBASIC4.53□□□□□ -1.68
TPM4P67936 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TPM4P67936 MIR1183-201ENST00000408856 89 ntBASIC4.53□□□□□ -1.68
TPM4P67936 RN7SKP229-201ENST00000410465 302 ntBASIC4.53□□□□□ -1.68
TPM4P67936 AC006065.1-201ENST00000422539 802 ntBASIC4.53□□□□□ -1.68
TPM4P67936 KCTD9P3-201ENST00000434597 1169 ntBASIC4.53□□□□□ -1.68
TPM4P67936 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TPM4P67936 RPL7P61-201ENST00000451721 751 ntBASIC4.53□□□□□ -1.68
TPM4P67936 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.53□□□□□ -1.68
TPM4P67936 DNAJC19P1-201ENST00000455312 319 ntBASIC4.53□□□□□ -1.68
TPM4P67936 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.53□□□□□ -1.68
TPM4P67936 AC083982.1-201ENST00000485679 344 ntBASIC4.53□□□□□ -1.68
TPM4P67936 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.53□□□□□ -1.68
TPM4P67936 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.53□□□□□ -1.68
TPM4P67936 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.53□□□□□ -1.68
TPM4P67936 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.53□□□□□ -1.68
TPM4P67936 RFPL1S-203ENST00000539579 330 ntBASIC4.53□□□□□ -1.68
TPM4P67936 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TPM4P67936 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.53□□□□□ -1.68
TPM4P67936 AC244505.7-201ENST00000599675 272 ntBASIC4.53□□□□□ -1.68
TPM4P67936 GMCL1P2-201ENST00000605230 823 ntBASIC4.53□□□□□ -1.68
TPM4P67936 AL034351.1-201ENST00000605288 668 ntBASIC4.53□□□□□ -1.68
TPM4P67936 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TPM4P67936 MIR6886-201ENST00000619864 61 ntBASIC4.53□□□□□ -1.68
TPM4P67936 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.53□□□□□ -1.68
TPM4P67936 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TPM4P67936 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
TPM4P67936 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.53□□□□□ -1.68
TPM4P67936 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TPM4P67936 OR10AB1P-202ENST00000641219 1686 ntBASIC4.53□□□□□ -1.68
TPM4P67936 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TPM4P67936 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
TPM4P67936 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TPM4P67936 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TPM4P67936 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.53□□□□□ -1.68
TPM4P67936 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
TPM4P67936 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TPM4P67936 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TPM4P67936 UBE3AP2-201ENST00000429033 2259 ntBASIC4.52□□□□□ -1.69
TPM4P67936 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.52□□□□□ -1.69
TPM4P67936 RNU1-87P-201ENST00000363727 170 ntBASIC4.52□□□□□ -1.69
TPM4P67936 RNU6-146P-201ENST00000384602 108 ntBASIC4.52□□□□□ -1.69
TPM4P67936 AL035696.2-201ENST00000407941 709 ntBASIC4.52□□□□□ -1.69
TPM4P67936 MIR1178-201ENST00000408396 91 ntBASIC4.52□□□□□ -1.69
TPM4P67936 RWDD4P2-201ENST00000426392 563 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms