Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AL020991.1-201ENST00000612314 373 ntBASIC5.71□□□□□ -1.5
YBX1P67809 MIR6793-201ENST00000612376 63 ntBASIC5.71□□□□□ -1.5
YBX1P67809 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC5.71□□□□□ -1.5
YBX1P67809 AL355974.3-201ENST00000617383 467 ntBASIC5.71□□□□□ -1.5
YBX1P67809 MIR6886-201ENST00000619864 61 ntBASIC5.71□□□□□ -1.5
YBX1P67809 AC010338.1-201ENST00000621823 717 ntBASIC5.71□□□□□ -1.5
YBX1P67809 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC5.71□□□□□ -1.5
YBX1P67809 AP000648.2-201ENST00000624182 404 ntBASIC5.71□□□□□ -1.5
YBX1P67809 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
YBX1P67809 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
YBX1P67809 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
YBX1P67809 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
YBX1P67809 AC107021.2-201ENST00000567714 2095 ntBASIC5.71□□□□□ -1.5
YBX1P67809 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.71□□□□□ -1.5
YBX1P67809 AL034370.1-201ENST00000397254 1590 ntBASIC5.71□□□□□ -1.5
YBX1P67809 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
YBX1P67809 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.71□□□□□ -1.5
YBX1P67809 AC011447.7-201ENST00000624228 1590 ntBASIC5.71□□□□□ -1.5
YBX1P67809 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
YBX1P67809 AC130304.1-201ENST00000622942 2385 ntBASIC5.71□□□□□ -1.5
YBX1P67809 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
YBX1P67809 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
YBX1P67809 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
YBX1P67809 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
YBX1P67809 AC025470.1-201ENST00000510053 2032 ntBASIC5.7□□□□□ -1.5
YBX1P67809 CASC19-260ENST00000641828 2001 ntBASIC5.7□□□□□ -1.5
YBX1P67809 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.7□□□□□ -1.5
YBX1P67809 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
YBX1P67809 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.7□□□□□ -1.5
YBX1P67809 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
YBX1P67809 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
YBX1P67809 RNU1-150P-201ENST00000362491 162 ntBASIC5.7□□□□□ -1.5
YBX1P67809 RNA5SP500-201ENST00000364486 119 ntBASIC5.7□□□□□ -1.5
YBX1P67809 RNA5SP211-201ENST00000365516 117 ntBASIC5.7□□□□□ -1.5
YBX1P67809 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
YBX1P67809 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
YBX1P67809 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.7□□□□□ -1.5
YBX1P67809 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.7□□□□□ -1.5
YBX1P67809 MYL6P5-201ENST00000412707 459 ntBASIC5.7□□□□□ -1.5
YBX1P67809 AL590806.1-201ENST00000415818 853 ntBASIC5.7□□□□□ -1.5
YBX1P67809 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC5.7□□□□□ -1.5
YBX1P67809 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC5.7□□□□□ -1.5
YBX1P67809 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.7□□□□□ -1.5
YBX1P67809 RPS4XP5-201ENST00000419038 768 ntBASIC5.7□□□□□ -1.5
YBX1P67809 AF228730.4-201ENST00000421457 183 ntBASIC5.7□□□□□ -1.5
YBX1P67809 FABP7P1-201ENST00000424004 391 ntBASIC5.7□□□□□ -1.5
YBX1P67809 AC099677.3-201ENST00000427081 395 ntBASIC5.7□□□□□ -1.5
YBX1P67809 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.7□□□□□ -1.5
YBX1P67809 AC073464.1-201ENST00000429823 534 ntBASIC5.7□□□□□ -1.5
YBX1P67809 FTH1P16-201ENST00000435241 552 ntBASIC5.7□□□□□ -1.5
YBX1P67809 AC093716.1-201ENST00000435923 377 ntBASIC5.7□□□□□ -1.5
YBX1P67809 AL391987.1-201ENST00000441025 200 ntBASIC5.7□□□□□ -1.5
YBX1P67809 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.7□□□□□ -1.5
YBX1P67809 RPS4XP4-201ENST00000443195 763 ntBASIC5.7□□□□□ -1.5
YBX1P67809 AC007677.1-201ENST00000445757 515 ntBASIC5.7□□□□□ -1.5
YBX1P67809 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.7□□□□□ -1.5
YBX1P67809 SNRPFP4-201ENST00000456366 242 ntBASIC5.7□□□□□ -1.5
YBX1P67809 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.7□□□□□ -1.5
YBX1P67809 AC079080.1-201ENST00000479841 822 ntBASIC5.7□□□□□ -1.5
YBX1P67809 AC006539.1-201ENST00000481419 501 ntBASIC5.7□□□□□ -1.5
YBX1P67809 HMGN1P12-201ENST00000499125 195 ntBASIC5.7□□□□□ -1.5
YBX1P67809 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.7□□□□□ -1.5
YBX1P67809 AC009646.1-201ENST00000510455 318 ntBASIC5.7□□□□□ -1.5
YBX1P67809 snoU109.5-201ENST00000516231 132 ntBASIC5.7□□□□□ -1.5
YBX1P67809 Y_RNA.701-201ENST00000516812 110 ntBASIC5.7□□□□□ -1.5
YBX1P67809 PAICSP4-201ENST00000517543 1253 ntBASIC5.7□□□□□ -1.5
YBX1P67809 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.7□□□□□ -1.5
YBX1P67809 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.7□□□□□ -1.5
YBX1P67809 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.7□□□□□ -1.5
YBX1P67809 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.7□□□□□ -1.5
YBX1P67809 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.7□□□□□ -1.5
YBX1P67809 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
YBX1P67809 AC137800.2-201ENST00000574375 120 ntBASIC5.7□□□□□ -1.5
YBX1P67809 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC5.7□□□□□ -1.5
YBX1P67809 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.7□□□□□ -1.5
YBX1P67809 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.7□□□□□ -1.5
YBX1P67809 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.7□□□□□ -1.5
YBX1P67809 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.7□□□□□ -1.5
YBX1P67809 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.7□□□□□ -1.5
YBX1P67809 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.7□□□□□ -1.5
YBX1P67809 AC131902.3-201ENST00000611767 581 ntBASIC5.7□□□□□ -1.5
YBX1P67809 AL359535.1-201ENST00000612100 1087 ntBASIC5.7□□□□□ -1.5
YBX1P67809 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC5.7□□□□□ -1.5
YBX1P67809 SNX18P12-201ENST00000624821 759 ntBASIC5.7□□□□□ -1.5
YBX1P67809 VPS8-228ENST00000628962 207 ntTSL 5 BASIC5.7□□□□□ -1.5
YBX1P67809 AC129915.3-201ENST00000634128 948 ntBASIC5.7□□□□□ -1.5
YBX1P67809 AC140479.2-201ENST00000421567 3130 ntBASIC5.7□□□□□ -1.5
YBX1P67809 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
YBX1P67809 MFSD8-219ENST00000641228 2559 ntBASIC5.7□□□□□ -1.5
YBX1P67809 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
YBX1P67809 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
YBX1P67809 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
YBX1P67809 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.7□□□□□ -1.5
YBX1P67809 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
YBX1P67809 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
YBX1P67809 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.69□□□□□ -1.5
YBX1P67809 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
YBX1P67809 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
YBX1P67809 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.69□□□□□ -1.5
YBX1P67809 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms