Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AL121657.1-201ENST00000327215 531 ntBASIC3.65□□□□□ -1.83
UBA52P62987 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
UBA52P62987 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
UBA52P62987 MIR423-201ENST00000362201 94 ntBASIC3.65□□□□□ -1.83
UBA52P62987 RNU1-85P-201ENST00000364127 164 ntBASIC3.65□□□□□ -1.83
UBA52P62987 MIR23B-201ENST00000384832 97 ntBASIC3.65□□□□□ -1.83
UBA52P62987 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.65□□□□□ -1.83
UBA52P62987 AC025750.1-201ENST00000399891 379 ntBASIC3.65□□□□□ -1.83
UBA52P62987 AL050305.1-201ENST00000399993 1230 ntBASIC3.65□□□□□ -1.83
UBA52P62987 RPL23AP26-201ENST00000412728 464 ntBASIC3.65□□□□□ -1.83
UBA52P62987 TMSB10P2-201ENST00000416049 131 ntBASIC3.65□□□□□ -1.83
UBA52P62987 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.65□□□□□ -1.83
UBA52P62987 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.65□□□□□ -1.83
UBA52P62987 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.65□□□□□ -1.83
UBA52P62987 AL365396.1-201ENST00000430854 671 ntBASIC3.65□□□□□ -1.83
UBA52P62987 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.65□□□□□ -1.83
UBA52P62987 RPL23AP93-201ENST00000440847 484 ntBASIC3.65□□□□□ -1.83
UBA52P62987 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.65□□□□□ -1.83
UBA52P62987 PHBP16-201ENST00000446318 950 ntBASIC3.65□□□□□ -1.83
UBA52P62987 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC3.65□□□□□ -1.83
UBA52P62987 RN7SL98P-201ENST00000462271 300 ntBASIC3.65□□□□□ -1.83
UBA52P62987 UQCRHP4-201ENST00000471686 272 ntBASIC3.65□□□□□ -1.83
UBA52P62987 PRELID3BP7-201ENST00000503606 469 ntBASIC3.65□□□□□ -1.83
UBA52P62987 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC3.65□□□□□ -1.83
UBA52P62987 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.65□□□□□ -1.83
UBA52P62987 CYCSP29-201ENST00000533731 318 ntBASIC3.65□□□□□ -1.83
UBA52P62987 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.65□□□□□ -1.83
UBA52P62987 AC106785.1-201ENST00000565935 262 ntBASIC3.65□□□□□ -1.83
UBA52P62987 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.65□□□□□ -1.83
UBA52P62987 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.65□□□□□ -1.83
UBA52P62987 AC019278.1-201ENST00000623516 479 ntBASIC3.65□□□□□ -1.83
UBA52P62987 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.65□□□□□ -1.83
UBA52P62987 LINC01808-202ENST00000641680 1116 ntBASIC3.65□□□□□ -1.83
UBA52P62987 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
UBA52P62987 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
UBA52P62987 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
UBA52P62987 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
UBA52P62987 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.65□□□□□ -1.83
UBA52P62987 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.65□□□□□ -1.83
UBA52P62987 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
UBA52P62987 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
UBA52P62987 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
UBA52P62987 AC007390.2-201ENST00000606229 3803 ntBASIC3.64□□□□□ -1.83
UBA52P62987 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
UBA52P62987 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.64□□□□□ -1.83
UBA52P62987 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.64□□□□□ -1.83
UBA52P62987 RHEBP3-201ENST00000411920 351 ntBASIC3.64□□□□□ -1.83
UBA52P62987 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC3.64□□□□□ -1.83
UBA52P62987 RPS3AP54-201ENST00000435535 734 ntBASIC3.64□□□□□ -1.83
UBA52P62987 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.64□□□□□ -1.83
UBA52P62987 AC105137.1-201ENST00000484355 562 ntBASIC3.64□□□□□ -1.83
UBA52P62987 RPL21P129-201ENST00000491732 478 ntBASIC3.64□□□□□ -1.83
UBA52P62987 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.64□□□□□ -1.83
UBA52P62987 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
UBA52P62987 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.64□□□□□ -1.83
UBA52P62987 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.64□□□□□ -1.83
UBA52P62987 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.64□□□□□ -1.83
UBA52P62987 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.64□□□□□ -1.83
UBA52P62987 AL160290.3-201ENST00000604869 165 ntBASIC3.64□□□□□ -1.83
UBA52P62987 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.64□□□□□ -1.83
UBA52P62987 AP003392.5-201ENST00000607857 415 ntBASIC3.64□□□□□ -1.83
UBA52P62987 ASNSP1-204ENST00000641977 1664 ntBASIC3.64□□□□□ -1.83
UBA52P62987 AC233968.1-201ENST00000611212 1300 ntBASIC3.64□□□□□ -1.83
UBA52P62987 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
UBA52P62987 CASC19-255ENST00000641733 1385 ntBASIC3.63□□□□□ -1.83
UBA52P62987 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
UBA52P62987 AC090017.1-201ENST00000548612 1779 ntBASIC3.63□□□□□ -1.83
UBA52P62987 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
UBA52P62987 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
UBA52P62987 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.63□□□□□ -1.83
UBA52P62987 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
UBA52P62987 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.63□□□□□ -1.83
UBA52P62987 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.63□□□□□ -1.83
UBA52P62987 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
UBA52P62987 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
UBA52P62987 MIR134-201ENST00000385258 73 ntBASIC3.63□□□□□ -1.83
UBA52P62987 AL445189.1-201ENST00000405722 338 ntBASIC3.63□□□□□ -1.83
UBA52P62987 OR51A6P-201ENST00000418680 1004 ntBASIC3.63□□□□□ -1.83
UBA52P62987 AL590609.2-201ENST00000421430 368 ntBASIC3.63□□□□□ -1.83
UBA52P62987 AC044797.1-201ENST00000445744 679 ntBASIC3.63□□□□□ -1.83
UBA52P62987 AL359073.1-201ENST00000448036 403 ntBASIC3.63□□□□□ -1.83
UBA52P62987 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.63□□□□□ -1.83
UBA52P62987 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.63□□□□□ -1.83
UBA52P62987 ISCUP1-201ENST00000454451 448 ntBASIC3.63□□□□□ -1.83
UBA52P62987 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.63□□□□□ -1.83
UBA52P62987 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.63□□□□□ -1.83
UBA52P62987 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.63□□□□□ -1.83
UBA52P62987 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
UBA52P62987 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.63□□□□□ -1.83
UBA52P62987 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.63□□□□□ -1.83
UBA52P62987 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
UBA52P62987 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.63□□□□□ -1.83
UBA52P62987 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
UBA52P62987 AC025884.1-201ENST00000556034 378 ntBASIC3.63□□□□□ -1.83
UBA52P62987 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.63□□□□□ -1.83
UBA52P62987 AP001160.4-201ENST00000596971 382 ntBASIC3.63□□□□□ -1.83
UBA52P62987 AP002967.1-201ENST00000624203 539 ntBASIC3.63□□□□□ -1.83
UBA52P62987 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.63□□□□□ -1.83
UBA52P62987 MIR3653-201ENST00000625572 110 ntBASIC3.63□□□□□ -1.83
UBA52P62987 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms