Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.47□□□□□ -1.69
CLDN20P56880 DNAJC19P8-201ENST00000452887 259 ntBASIC4.47□□□□□ -1.69
CLDN20P56880 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.47□□□□□ -1.69
CLDN20P56880 RPS3AP41-201ENST00000462701 778 ntBASIC4.47□□□□□ -1.69
CLDN20P56880 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN20P56880 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.47□□□□□ -1.69
CLDN20P56880 AC091860.1-201ENST00000505723 432 ntBASIC4.47□□□□□ -1.69
CLDN20P56880 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.47□□□□□ -1.69
CLDN20P56880 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.47□□□□□ -1.69
CLDN20P56880 AL671862.1-201ENST00000515851 349 ntBASIC4.47□□□□□ -1.69
CLDN20P56880 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.47□□□□□ -1.69
CLDN20P56880 DEFB130C-202ENST00000530001 230 ntBASIC4.47□□□□□ -1.69
CLDN20P56880 AC022882.1-201ENST00000532142 501 ntBASIC4.47□□□□□ -1.69
CLDN20P56880 GCSHP4-201ENST00000538792 439 ntBASIC4.47□□□□□ -1.69
CLDN20P56880 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.47□□□□□ -1.69
CLDN20P56880 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.47□□□□□ -1.69
CLDN20P56880 MIR3934-201ENST00000579806 107 ntBASIC4.47□□□□□ -1.69
CLDN20P56880 AC234772.3-201ENST00000602277 528 ntBASIC4.47□□□□□ -1.69
CLDN20P56880 AC009948.4-201ENST00000604692 675 ntBASIC4.47□□□□□ -1.69
CLDN20P56880 BNIP3P4-201ENST00000604946 565 ntBASIC4.47□□□□□ -1.69
CLDN20P56880 IMMP1LP1-201ENST00000605170 488 ntBASIC4.47□□□□□ -1.69
CLDN20P56880 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN20P56880 VN1R74P-201ENST00000613259 503 ntBASIC4.47□□□□□ -1.69
CLDN20P56880 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.47□□□□□ -1.69
CLDN20P56880 AC010975.3-201ENST00000618727 978 ntBASIC4.47□□□□□ -1.69
CLDN20P56880 AC015726.3-201ENST00000624501 418 ntBASIC4.47□□□□□ -1.69
CLDN20P56880 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN20P56880 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.47□□□□□ -1.69
CLDN20P56880 AC096656.1-201ENST00000623826 1364 ntBASIC4.47□□□□□ -1.69
CLDN20P56880 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN20P56880 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.47□□□□□ -1.69
CLDN20P56880 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN20P56880 AC006042.3-201ENST00000454684 1469 ntBASIC4.47□□□□□ -1.69
CLDN20P56880 ECM1P2-201ENST00000503354 1577 ntBASIC4.47□□□□□ -1.69
CLDN20P56880 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.47□□□□□ -1.69
CLDN20P56880 OR51H2P-202ENST00000641424 3046 ntBASIC4.47□□□□□ -1.69
CLDN20P56880 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.47□□□□□ -1.69
CLDN20P56880 CASC19-204ENST00000641001 2055 ntBASIC4.47□□□□□ -1.69
CLDN20P56880 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN20P56880 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLDN20P56880 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.69
CLDN20P56880 SEPT7P7-201ENST00000420492 1301 ntBASIC4.46□□□□□ -1.69
CLDN20P56880 AL355578.1-201ENST00000607405 1328 ntBASIC4.46□□□□□ -1.69
CLDN20P56880 AC099786.3-201ENST00000565735 1410 ntBASIC4.46□□□□□ -1.69
CLDN20P56880 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CLDN20P56880 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CLDN20P56880 LINC01355-201ENST00000566551 5444 ntBASIC4.46□□□□□ -1.69
CLDN20P56880 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLDN20P56880 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLDN20P56880 AC099654.2-201ENST00000433031 1980 ntBASIC4.46□□□□□ -1.7
CLDN20P56880 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLDN20P56880 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLDN20P56880 AC111188.2-201ENST00000529697 1387 ntBASIC4.46□□□□□ -1.7
CLDN20P56880 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLDN20P56880 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLDN20P56880 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CLDN20P56880 RNU1-94P-201ENST00000362627 173 ntBASIC4.46□□□□□ -1.7
CLDN20P56880 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.46□□□□□ -1.7
CLDN20P56880 HIGD1AP15-201ENST00000416198 280 ntBASIC4.46□□□□□ -1.7
CLDN20P56880 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.46□□□□□ -1.7
CLDN20P56880 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.46□□□□□ -1.7
CLDN20P56880 XKRYP1-201ENST00000423438 492 ntBASIC4.46□□□□□ -1.7
CLDN20P56880 OR5AW1P-201ENST00000426334 1006 ntBASIC4.46□□□□□ -1.7
CLDN20P56880 AC104837.2-201ENST00000427236 424 ntBASIC4.46□□□□□ -1.7
CLDN20P56880 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.46□□□□□ -1.7
CLDN20P56880 XKRYP2-201ENST00000432915 492 ntBASIC4.46□□□□□ -1.7
CLDN20P56880 CBX1P4-201ENST00000439415 457 ntBASIC4.46□□□□□ -1.7
CLDN20P56880 ARL4AP3-201ENST00000441452 574 ntBASIC4.46□□□□□ -1.7
CLDN20P56880 MTCYBP42-201ENST00000444653 1130 ntBASIC4.46□□□□□ -1.7
CLDN20P56880 ZNF886P-201ENST00000450781 723 ntBASIC4.46□□□□□ -1.7
CLDN20P56880 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.46□□□□□ -1.7
CLDN20P56880 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.46□□□□□ -1.7
CLDN20P56880 RPL7P16-201ENST00000479738 738 ntBASIC4.46□□□□□ -1.7
CLDN20P56880 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.46□□□□□ -1.7
CLDN20P56880 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.46□□□□□ -1.7
CLDN20P56880 RN7SKP287-201ENST00000516546 266 ntBASIC4.46□□□□□ -1.7
CLDN20P56880 snoU109.6-201ENST00000516831 118 ntBASIC4.46□□□□□ -1.7
CLDN20P56880 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.46□□□□□ -1.7
CLDN20P56880 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.46□□□□□ -1.7
CLDN20P56880 AC021006.3-201ENST00000530771 192 ntBASIC4.46□□□□□ -1.7
CLDN20P56880 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.46□□□□□ -1.7
CLDN20P56880 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLDN20P56880 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.46□□□□□ -1.7
CLDN20P56880 SULT1C2P2-201ENST00000562517 294 ntBASIC4.46□□□□□ -1.7
CLDN20P56880 MTCO1P40-201ENST00000574371 625 ntBASIC4.46□□□□□ -1.7
CLDN20P56880 AC022022.2-201ENST00000602989 360 ntBASIC4.46□□□□□ -1.7
CLDN20P56880 AC093424.1-201ENST00000604999 338 ntBASIC4.46□□□□□ -1.7
CLDN20P56880 AC087783.2-201ENST00000605070 562 ntBASIC4.46□□□□□ -1.7
CLDN20P56880 AC004948.1-201ENST00000609858 672 ntBASIC4.46□□□□□ -1.7
CLDN20P56880 Mico1.1-201ENST00000611698 204 ntBASIC4.46□□□□□ -1.7
CLDN20P56880 AC109454.4-201ENST00000623411 649 ntBASIC4.46□□□□□ -1.7
CLDN20P56880 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.46□□□□□ -1.7
CLDN20P56880 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.46□□□□□ -1.7
CLDN20P56880 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLDN20P56880 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLDN20P56880 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLDN20P56880 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLDN20P56880 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.46□□□□□ -1.7
CLDN20P56880 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLDN20P56880 DHX9P1-201ENST00000436565 3076 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms