Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC073587.1-201ENST00000447093 876 ntBASIC4.88□□□□□ -1.63
NR1H2P55055 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.88□□□□□ -1.63
NR1H2P55055 AURKAPS1-201ENST00000451805 1212 ntBASIC4.88□□□□□ -1.63
NR1H2P55055 RN7SL808P-201ENST00000496066 299 ntBASIC4.88□□□□□ -1.63
NR1H2P55055 AC093720.1-201ENST00000505681 714 ntBASIC4.88□□□□□ -1.63
NR1H2P55055 AC006499.3-201ENST00000506077 748 ntBASIC4.88□□□□□ -1.63
NR1H2P55055 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.88□□□□□ -1.63
NR1H2P55055 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.88□□□□□ -1.63
NR1H2P55055 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.88□□□□□ -1.63
NR1H2P55055 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.88□□□□□ -1.63
NR1H2P55055 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.88□□□□□ -1.63
NR1H2P55055 OR4C2P-201ENST00000530855 1064 ntBASIC4.88□□□□□ -1.63
NR1H2P55055 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.88□□□□□ -1.63
NR1H2P55055 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NR1H2P55055 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.88□□□□□ -1.63
NR1H2P55055 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.88□□□□□ -1.63
NR1H2P55055 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.88□□□□□ -1.63
NR1H2P55055 AC005191.1-201ENST00000603950 358 ntBASIC4.88□□□□□ -1.63
NR1H2P55055 AL365400.2-201ENST00000605604 902 ntBASIC4.88□□□□□ -1.63
NR1H2P55055 AC010857.1-201ENST00000606398 594 ntBASIC4.88□□□□□ -1.63
NR1H2P55055 RNU4-5P-201ENST00000607255 135 ntBASIC4.88□□□□□ -1.63
NR1H2P55055 AL512329.2-201ENST00000607350 548 ntBASIC4.88□□□□□ -1.63
NR1H2P55055 AP000238.1-201ENST00000608759 426 ntBASIC4.88□□□□□ -1.63
NR1H2P55055 AL359535.1-201ENST00000612100 1087 ntBASIC4.88□□□□□ -1.63
NR1H2P55055 AC009704.2-201ENST00000618739 483 ntBASIC4.88□□□□□ -1.63
NR1H2P55055 AC132068.1-201ENST00000623805 459 ntBASIC4.88□□□□□ -1.63
NR1H2P55055 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NR1H2P55055 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NR1H2P55055 AC011978.2-201ENST00000569835 2054 ntBASIC4.88□□□□□ -1.63
NR1H2P55055 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NR1H2P55055 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
NR1H2P55055 CASC19-221ENST00000641309 1382 ntBASIC4.88□□□□□ -1.63
NR1H2P55055 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NR1H2P55055 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.88□□□□□ -1.63
NR1H2P55055 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
NR1H2P55055 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.88□□□□□ -1.63
NR1H2P55055 AL139811.1-201ENST00000424779 2299 ntBASIC4.88□□□□□ -1.63
NR1H2P55055 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NR1H2P55055 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
NR1H2P55055 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.87□□□□□ -1.63
NR1H2P55055 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.87□□□□□ -1.63
NR1H2P55055 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.87□□□□□ -1.63
NR1H2P55055 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NR1H2P55055 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NR1H2P55055 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NR1H2P55055 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
NR1H2P55055 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
NR1H2P55055 AC023421.1-201ENST00000590535 1785 ntBASIC4.87□□□□□ -1.63
NR1H2P55055 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.87□□□□□ -1.63
NR1H2P55055 MIR223-201ENST00000385204 110 ntBASIC4.87□□□□□ -1.63
NR1H2P55055 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
NR1H2P55055 GSTA8P-201ENST00000404253 637 ntBASIC4.87□□□□□ -1.63
NR1H2P55055 RN7SKP216-201ENST00000411050 312 ntBASIC4.87□□□□□ -1.63
NR1H2P55055 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.87□□□□□ -1.63
NR1H2P55055 SLC35E1P1-201ENST00000419313 864 ntBASIC4.87□□□□□ -1.63
NR1H2P55055 AC027644.1-201ENST00000419595 298 ntBASIC4.87□□□□□ -1.63
NR1H2P55055 E2F6P2-201ENST00000420708 748 ntBASIC4.87□□□□□ -1.63
NR1H2P55055 NANOGP5-201ENST00000424456 877 ntBASIC4.87□□□□□ -1.63
NR1H2P55055 CNOT7P1-201ENST00000429006 852 ntBASIC4.87□□□□□ -1.63
NR1H2P55055 AC006335.2-201ENST00000437993 330 ntBASIC4.87□□□□□ -1.63
NR1H2P55055 RPL7P31-201ENST00000450192 724 ntBASIC4.87□□□□□ -1.63
NR1H2P55055 OTX2P1-201ENST00000450956 354 ntBASIC4.87□□□□□ -1.63
NR1H2P55055 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.87□□□□□ -1.63
NR1H2P55055 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.87□□□□□ -1.63
NR1H2P55055 AC108751.2-201ENST00000469993 231 ntBASIC4.87□□□□□ -1.63
NR1H2P55055 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.87□□□□□ -1.63
NR1H2P55055 AC011037.1-201ENST00000483964 558 ntBASIC4.87□□□□□ -1.63
NR1H2P55055 RPS23P1-201ENST00000491662 432 ntBASIC4.87□□□□□ -1.63
NR1H2P55055 AC020890.1-201ENST00000491837 504 ntBASIC4.87□□□□□ -1.63
NR1H2P55055 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NR1H2P55055 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.87□□□□□ -1.63
NR1H2P55055 AC110792.2-201ENST00000510278 224 ntBASIC4.87□□□□□ -1.63
NR1H2P55055 AC023632.1-201ENST00000518463 375 ntBASIC4.87□□□□□ -1.63
NR1H2P55055 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.87□□□□□ -1.63
NR1H2P55055 AC134698.5-201ENST00000519444 336 ntBASIC4.87□□□□□ -1.63
NR1H2P55055 AP001207.1-201ENST00000524051 481 ntBASIC4.87□□□□□ -1.63
NR1H2P55055 OR10V3P-201ENST00000525712 725 ntBASIC4.87□□□□□ -1.63
NR1H2P55055 OR8K4P-201ENST00000534608 872 ntBASIC4.87□□□□□ -1.63
NR1H2P55055 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
NR1H2P55055 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.87□□□□□ -1.63
NR1H2P55055 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.87□□□□□ -1.63
NR1H2P55055 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.87□□□□□ -1.63
NR1H2P55055 AC044913.1-201ENST00000557200 430 ntBASIC4.87□□□□□ -1.63
NR1H2P55055 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.87□□□□□ -1.63
NR1H2P55055 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.87□□□□□ -1.63
NR1H2P55055 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.87□□□□□ -1.63
NR1H2P55055 AGGF1P6-201ENST00000569213 976 ntBASIC4.87□□□□□ -1.63
NR1H2P55055 AC012616.1-201ENST00000600294 197 ntBASIC4.87□□□□□ -1.63
NR1H2P55055 AP000769.2-201ENST00000602344 396 ntBASIC4.87□□□□□ -1.63
NR1H2P55055 AC087283.1-201ENST00000604029 1074 ntBASIC4.87□□□□□ -1.63
NR1H2P55055 AC115621.1-201ENST00000604653 858 ntBASIC4.87□□□□□ -1.63
NR1H2P55055 AL583856.2-201ENST00000606298 543 ntBASIC4.87□□□□□ -1.63
NR1H2P55055 AL445222.1-201ENST00000607259 628 ntBASIC4.87□□□□□ -1.63
NR1H2P55055 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.87□□□□□ -1.63
NR1H2P55055 MIR6748-201ENST00000610433 71 ntBASIC4.87□□□□□ -1.63
NR1H2P55055 AC090510.2-201ENST00000617465 629 ntBASIC4.87□□□□□ -1.63
NR1H2P55055 AC109809.1-201ENST00000619665 545 ntBASIC4.87□□□□□ -1.63
NR1H2P55055 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.87□□□□□ -1.63
NR1H2P55055 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.87□□□□□ -1.63
NR1H2P55055 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms